Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_H07
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 168 FXYHFMQF-FICEVFTKFLCNSL 103
           F    M F FIC  FTKF  N++
Sbjct: 434 FLQKAMDFPFICNSFTKFEFNTV 456


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -3

Query: 614 VNYFST*FK**ILIISEKYIFNSFIYIVITFTL*IGMYLIC 492
           +N+F++  +   L +  K   +S +   IT     G+ LIC
Sbjct: 255 LNFFTSTLEIDNLYLKHKLEISSLVQTAITLVAMCGLVLIC 295


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 652 AFKHTDYFTKFVWLTILVHNLSDKY 578
           A +H+DY  K   +  + H   +KY
Sbjct: 141 AIEHSDYRAKLAQIRQIYHQELEKY 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,510
Number of Sequences: 336
Number of extensions: 2571
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)