Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_H07
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 56 2e-08
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 56 2e-08
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 47 1e-05
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 44 9e-05
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 44 9e-05
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 44 9e-05
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 42 4e-04
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 42 4e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 42 4e-04
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 41 7e-04
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 41 9e-04
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 39 0.003
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 38 0.005
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 37 0.011
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 35 0.044
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 35 0.044
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 32 0.41
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 32 0.41
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 30 1.2
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 2.2
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 29 2.9
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 29 2.9
AF016424-5|AAB65326.1| 282|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 27 8.8
U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z12017-4|CAA78051.2| 148|Caenorhabditis elegans Hypothetical
protein R08D7.5 protein.
Length = 148
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +1
Query: 67 PRSKCKISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMKXTXL 237
P SK I+ NLK VAKELGE L D + EMI EA + IN+++F IMK T L
Sbjct: 91 PESKGTITVANLKMVAKELGETLADADFDEMIREAGGDNNTGINEQQFFEIMKKTCL 147
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
IS L+ V LGE LTDEE+ EMI EAD GDG++N EEF+ +M
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
I+ K L V + LG+N T+ EL +MI E D G+G I+ EFL +M
Sbjct: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
IS L+ V LGE LTDEE+ EMI EAD GDG++N EEF+ +M
Sbjct: 101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
I+ K L V + LG+N T+ EL +MI E D G+G I+ EFL +M
Sbjct: 28 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEF 210
IS L+ V LGE LTDEE+ EMI EAD GDG+I + F
Sbjct: 50 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQIMRVSF 91
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
IS LK + KE+ ++LTD++L E + E D G G+I EEF +M
Sbjct: 111 ISRPTLKALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWELM 156
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
IS LK + KE+ ++LTD++L E + E D G G+I EEF +M
Sbjct: 111 ISRPTLKALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWELM 156
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
IS LK + KE+ ++LTD++L E + E D G G+I EEF +M
Sbjct: 111 ISRPTLKALLKEIADDLTDQQLEEAVDEIDEDGSGKIEFEEFWELM 156
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS K L + LG+N T++E+ EMI E D G+G+I EF +MK
Sbjct: 98 ISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMK 144
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 121 LGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
+G ++EE+ EMI E D GDGEI+ EEF+++M
Sbjct: 182 MGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 215
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
I+ +L+ + + L +N+++EEL EMI E D G G ++ +EF+ +M
Sbjct: 112 INVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 106 RVAKELGENLTDEELHEMIXEADXXGDGEINQEEF 210
++ + +G+ + +L ++I E D G GEI EEF
Sbjct: 42 QILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEF 76
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS K L + LG+N T++E+ EMI E D G+G+I EF +MK
Sbjct: 41 ISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMK 87
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 121 LGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
+G ++EE+ EMI E D GDGEI+ EEF+++M
Sbjct: 125 MGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 158
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
I+ +L+ + + L +N+++EEL EMI E D G G ++ +EF+ +M
Sbjct: 112 INVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 106 RVAKELGENLTDEELHEMIXEADXXGDGEINQEEF 210
++ + +G+ + +L ++I E D G GEI EEF
Sbjct: 42 QILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEF 76
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS K L + LG+N T++EL +M+ E D G G I+ EF ++MK
Sbjct: 52 ISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMK 98
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 121 LGENLTDEELHEMIXEADXXGDGEINQEEF 210
+G+ +D+E+ E+I E D GDG+I+ EEF
Sbjct: 136 MGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS K L + LG+N T++EL +M+ E D G G I+ EF ++MK
Sbjct: 52 ISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMK 98
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 121 LGENLTDEELHEMIXEADXXGDGEINQEEF 210
+G+ +D+E+ E+I E D GDG+I+ EEF
Sbjct: 136 MGDQFSDQEVDEIIAEIDIDGDGQIDYEEF 165
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
I F LKR+ ++LGE T L E+I + D DG+I+Q EF I +
Sbjct: 561 IDFNELKRMMEKLGEAQTHIALKELIKKVDEDQDGKISQREFFLIFR 607
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS +L V +LGE LT+ E EMI + D DG I+ +EF+ I+K
Sbjct: 97 ISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVNIIK 143
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +1
Query: 82 KISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
+I+ + L+ +LGE ++ ++ MI +AD G+G I+ +EFL +++
Sbjct: 23 RITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNVLR 70
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
++ K L + LG N T+EEL M+ E D G+G+I+ EF ++MK
Sbjct: 40 MNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMMK 86
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
I+ + K +GE ++EE+ E+I E D GD +I+ +EF+ ++
Sbjct: 112 ITAQEFKHFMTTMGERFSEEEVDEIIREVDKDGDEQIDLDEFVNMV 157
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS K L + LG+N T++++ E+I + D G+G++ EF +MK
Sbjct: 46 ISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCVMMK 92
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRI 219
I+ K +G + E+ EM+ E D G+GEI+ EEF++I
Sbjct: 118 ITANEFKLFMINMGMCFDEVEVEEMMNEVDCDGNGEIDYEEFVKI 162
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMKXTXL 237
I + L+ V +++G++ T++EL M AD DG I+ +EFL I K L
Sbjct: 38 IQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLVIAKANPL 88
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIM 222
I+ L+ + +G +L+D+++ + D DG+IN +EF +M
Sbjct: 107 ITRSELRTAFQRMGHSLSDQDIKAIYRHVDQNNDGKINFQEFCEMM 152
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
IS K+ + + +ELG+ ++ + E+ EAD G+G I+ +EF ++K
Sbjct: 147 ISKKDFRFILRELGDITDNQIIDEIFNEADVDGNGVIDYDEFTYMVK 193
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRI 219
IS L+ V L LT+EE+ + I AD GDG ++ EEF+ +
Sbjct: 296 ISVAELQAVMTNLQAWLTEEEIDDGIRSADISGDGLVDLEEFIDV 340
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
I + LK+ +G + E+ +I E D G+GEI+ EEF MK
Sbjct: 68 IGNEELKQAMISIGLHANKAEIDNVIKEVDADGNGEIDFEEFCACMK 114
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 76 KCKISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRI 219
K I+ +L++ +E + + + LHE++ E D +GEI EF ++
Sbjct: 641 KGHITVNDLRKHFREHNQKIDERVLHELLNEVDLNKNGEIEIAEFFQL 688
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 76 KCKISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRI 219
K I+ +L++ +E + + + LHE++ E D +GEI EF ++
Sbjct: 641 KGHITVNDLRKHFREHNQKIDERVLHELLNEVDLNKNGEIEIAEFFQL 688
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 85 ISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFL 213
IS + ++ ELG +++ + + ++ +D GDG+I+ EEFL
Sbjct: 67 ISSSEVAKMLNELGIDVSPKVVQAVMRSSDVSGDGQIDFEEFL 109
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +1
Query: 121 LGENLTDEELHEM----IXEADXXGDGEINQEEFLRIMKXTXL 237
+G N+T ++L ++ I EAD DG+I+ +EF R M+ T +
Sbjct: 143 VGANITSDQLDKIADRTIEEADADRDGKISFDEFCRAMEKTDI 185
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +1
Query: 121 LGENLTDEELHEM----IXEADXXGDGEINQEEFLRIMKXTXL 237
+G N+T ++L ++ + EAD DG+I+ E+F R M+ T +
Sbjct: 161 VGANITSDQLDKIADKTLEEADQDRDGKISFEDFCRAMEKTDI 203
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 73 SKCKISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMKXT 231
SK ++ ++L++V +L +N +L + E D G G+I + EFLR + T
Sbjct: 17 SKGYLTMEDLRKVCPQLDDN----DLRFIFTELDQDGSGKIEKLEFLRGFQDT 65
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +1
Query: 85 ISFKNLKRVAKEL-GENLTDEELHEMIXEA----DXXGDGEINQEEFLRIMKXT 231
IS L +V K + G NL D +L +++ + D GDG+I+ +EF +++ T
Sbjct: 107 ISNGELFQVLKMMVGNNLKDSQLQQIVDKTILFHDKDGDGKISFQEFCDVVEHT 160
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +1
Query: 85 ISFKNLKRVAKEL-GENLTDEELHEMIXEA----DXXGDGEINQEEFLRIMKXT 231
IS L +V K + G NL D +L +++ + D GDG+I+ +EF +++ T
Sbjct: 107 ISNGELFQVLKMMVGNNLKDSQLQQIVDKTILFHDKDGDGKISFQEFCDVVEHT 160
>AF016424-5|AAB65326.1| 282|Caenorhabditis elegans Hypothetical
protein F39G3.4 protein.
Length = 282
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 302 NSFKNSNLRFYFKH*MFATSVLSLIFYVQVCLFXYFAN 415
NSF ++ + + FA SV L+ ++ VCL YF N
Sbjct: 31 NSFISTKIMSSLGYFEFAASVTHLVGFITVCLNGYFFN 68
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +1
Query: 82 KISFKNLKRVAKELGENLTDEELHEMIXEADXXGDGEINQEEFLRIMK 225
+IS + + V + LG+N T+ E+H+ + D + ++ E+F+ I +
Sbjct: 21 RISVQQVGDVLRALGQNPTEAEIHKCVGSFDR--EARLSFEDFVPIFQ 66
>U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical
protein T20D4.9 protein.
Length = 459
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 519 SKCYNYVYETIKNI--FLTNN*YLSLKLCTKIVNQTNL 626
S+ ++++ ET+KN+ LTN Y SL +++NQ NL
Sbjct: 91 SEKFSFMVETLKNVNLTLTNIFYNSLYANIEVLNQLNL 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,586,651
Number of Sequences: 27780
Number of extensions: 200462
Number of successful extensions: 509
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -