Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_H04
(502 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 106 2e-22
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 106 3e-22
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 105 7e-22
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 91 2e-17
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 79 7e-14
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 64 1e-09
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 58 1e-07
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 55 1e-06
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 54 2e-06
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 53 3e-06
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 52 6e-06
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 52 6e-06
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 51 1e-05
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 50 4e-05
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 49 7e-05
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 47 2e-04
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 47 3e-04
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 46 5e-04
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 45 8e-04
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 45 8e-04
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 44 0.001
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 44 0.003
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 43 0.003
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 42 0.006
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 42 0.008
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 41 0.014
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 40 0.042
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 39 0.073
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.13
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 36 0.68
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 35 0.90
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 35 1.2
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 35 1.2
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 33 2.7
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 33 2.7
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 4.8
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 4.8
UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1; Cenarch... 33 4.8
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 33 4.8
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 32 6.3
UniRef50_UPI0000E46A01 Cluster: PREDICTED: similar to LOC402912 ... 32 8.3
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 32 8.3
UniRef50_Q22UP2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1; C... 32 8.3
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 106 bits (255), Expect = 2e-22
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEASA 398
EIEYYA+LA TGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE ++
Sbjct: 75 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQTS 129
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 106 bits (254), Expect = 3e-22
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 389
EIEYYA+LA TGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 59 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +2
Query: 71 RNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+ K+ +NSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P
Sbjct: 5 KKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCP 53
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 105 bits (251), Expect = 7e-22
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 386
EIEYYA+LA TGVHHYSGNNIELGTACGKY+RVCTLAITDPGDSDII ++P
Sbjct: 56 EIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMP 106
Score = 68.9 bits (161), Expect = 6e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +2
Query: 71 RNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+ +++ +NSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTP 50
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 90.6 bits (215), Expect = 2e-17
Identities = 37/51 (72%), Positives = 45/51 (88%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 386
EIEYYA+LA GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII ++P
Sbjct: 59 EIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109
Score = 65.3 bits (152), Expect = 7e-10
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +2
Query: 68 QRNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
++ K+ +NSRLALVMKSGKY LGYK LK+LR K KL++I+ N PP
Sbjct: 4 EKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPP 54
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 78.6 bits (185), Expect = 7e-14
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 371
EIEYY L+ T +HHYSGNN++LGTACG+++R C L+ITD GDSDI
Sbjct: 57 EIEYYCTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
Score = 61.7 bits (143), Expect = 9e-09
Identities = 26/41 (63%), Positives = 36/41 (87%)
Frame = +2
Query: 98 LNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
+N+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP
Sbjct: 12 INTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPP 52
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 64.5 bits (150), Expect = 1e-09
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = +2
Query: 83 RPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+ +N +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTP 49
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 383
E+EYYA+L+ T V+++ G N ELGTA GK +RV ++I + GDSDI+TTL
Sbjct: 55 ELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 57.6 bits (133), Expect = 1e-07
Identities = 22/51 (43%), Positives = 37/51 (72%)
Frame = +3
Query: 237 IEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 389
IEYYA+L+ + + G+N++LGTACGKY+R ++I D G+S+I+ + +
Sbjct: 59 IEYYAMLSGCDILPFDGDNVDLGTACGKYFRSSVISIIDAGESEILKMIKQ 109
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 68 QRNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
++ R + + L+LV KSGKY LG QTLK+LR G+AKLVI A N P
Sbjct: 3 RKKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAP 53
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 54.8 bits (126), Expect = 1e-06
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGD 362
E+EYYA+L VHH+ GNN++LG +CGK Y L IT+ G+
Sbjct: 58 ELEYYAMLNKCHVHHFYGNNVDLGLSCGKSYGCSCLGITESGE 100
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 80 KRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKEI 232
K S L+S+L +++K+GK+ GYK TLK LR GK K++II N P +++
Sbjct: 7 KSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKL 57
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3
Query: 288 NNIELGTACGKYYRVCTLAITDPGDSDIITTLP 386
+N++LGTACGKY++V L+I DPGDSDII +P
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDPGDSDIIKQMP 46
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 53.2 bits (122), Expect = 3e-06
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 98 LNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P
Sbjct: 10 VNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCP 49
Score = 35.9 bits (79), Expect = 0.51
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+IEYYA+LA + Y GNN++LGT G + I G SD I
Sbjct: 55 QIEYYAMLAQITIVLYQGNNVDLGT--GVIWEAQLFLIEFMGMSDFI 99
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+IEYYA L+ V+ + G ++ELG+ CGK + V L I DPGDS I+
Sbjct: 48 DIEYYAKLSEIPVYTHEGTSVELGSVCGKPFTVGALLIQDPGDSTIL 94
Score = 35.5 bits (78), Expect = 0.68
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 110 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+ + + +G LG K+T+++L+ GK KLV++A N P
Sbjct: 7 IRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIP 42
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 392
+IEYYA LA V Y G +++LG CG+ + V ++A+ D G+SD+I T+ +A
Sbjct: 49 DIEYYAELADVPVFVYPGTSMDLGDVCGRPHVVASMAVLDDGESDLIATVRKA 101
Score = 39.1 bits (87), Expect = 0.055
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 95 QLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
++ ++ + +++G LG QT+K L+ GK KLVI+A N P
Sbjct: 3 EIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCP 43
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 80 KRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
K+ ++ L LV+KSGKY LG Q ++ +R GKA+LV +A N PP
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPP 54
Score = 38.7 bits (86), Expect = 0.073
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 383
+++Y L+ T V ++G++ ELG A G+ + V + I + GD+D+ + L
Sbjct: 59 QVDYLCHLSKTPVRVFAGSSRELGIAVGRQFNVSIMTILEAGDADLTSIL 108
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 49.6 bits (113), Expect = 4e-05
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+I YYA L+ V+ + G ++ELGT GK + V +LAI DPG+S I+
Sbjct: 48 DIYYYAKLSDIPVYEFEGTSVELGTLLGKPFVVASLAIVDPGESKIL 94
Score = 40.7 bits (91), Expect = 0.018
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 110 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKEI*D 238
L M++GK LG +T++ + G AKL+I+AKNA PKEI D
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNA--PKEIKD 47
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 48.8 bits (111), Expect = 7e-05
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 389
+I +YA L+ V+ Y G+ +LGT CGK + + T++I D GDS I+ + E
Sbjct: 56 DIMHYAKLSNIPVYEYKGSGWDLGTLCGKPFMISTISIIDEGDSKILDIIKE 107
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+IEYYA LA + + G++IELG A + +++ LA+ DPG S+I+
Sbjct: 52 DIEYYAKLAGIPIFVFPGSSIELGAAAKRPHKIMALAVIDPGQSEIL 98
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 98 LNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+ L + + +G +G+++T + L G KLVIIA NAP
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAP 46
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 46.8 bits (106), Expect = 3e-04
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +3
Query: 270 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIIT 377
+H + G+++ LG ACGK + V TLAI PG+SDI++
Sbjct: 57 IHTFEGSSVALGKACGKPFMVSTLAIVSPGESDILS 92
Score = 37.5 bits (83), Expect = 0.17
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 101 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
N+ L +K+G LG T K +++GKA++V+IA N P
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCP 42
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 68 QRNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKEI 232
Q +R+R +N++L LVMKSGKY LGYK LK + + ++ K P +E+
Sbjct: 21 QXSRRRARRNINNKLQLVMKSGKYTLGYKTVLKDAPELQGEVDYPRKQLPSAQEV 75
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 45.2 bits (102), Expect = 8e-04
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 92 SQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+++ + + V+K+G Y LG K TLK+LR G+AK VI+A N P
Sbjct: 2 TEVETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCP 43
Score = 34.3 bits (75), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 279 YSGNNIELGTACGKYYRVCTLAITD 353
Y+G N+ELG CGK + V +AIT+
Sbjct: 60 YNGTNMELGALCGKPFSVAAMAITE 84
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 45.2 bits (102), Expect = 8e-04
Identities = 16/34 (47%), Positives = 28/34 (82%)
Frame = +2
Query: 119 VMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
++K+G Y +G+KQ+LK ++ G+AK ++IA+N PP
Sbjct: 10 LVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPP 43
Score = 39.9 bits (89), Expect = 0.031
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 392
++EYYA LA + Y G +++G G+ + V LA+ D G S I+ EA
Sbjct: 48 KLEYYAKLAGIPIIVYRGTRMDMGLVMGRRHGVSVLAVIDEGSSRILEQAEEA 100
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+IEYYA LA + + G++IELG A + +++ LA+ D G S+I+
Sbjct: 49 DIEYYAKLAGVPIFVFPGSSIELGAAAKRPHKIMALAVIDAGQSEIL 95
Score = 37.1 bits (82), Expect = 0.22
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 98 LNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
++ L + + +GK +G+++T K L G KL+I+A NAP
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAP 43
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 71 RNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPK 226
R + + S L L M++GKY +G+K+ +K++ KAK ++I+ N P K
Sbjct: 2 RGKSNKGDNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFPSTK 53
Score = 33.5 bits (73), Expect = 2.7
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 237 IEYYALLAX-TGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+EYY++LA + +S NN ELG+ + +R+ ++I D G++++I
Sbjct: 57 LEYYSVLAGGLPIIFHSANNEELGSITERGHRLGCISIIDQGEAELI 103
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +3
Query: 279 YSGNNIELGTACGKYYRVCTLAITDPGDSDIIT 377
Y G+ ++LG ACGK + V LAI + GDSDI+T
Sbjct: 60 YEGSGVQLGRACGKPFIVSALAIEESGDSDILT 92
Score = 38.3 bits (85), Expect = 0.096
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 101 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
N+ L +K+GK LG +T ++ +G AKLV++A N P
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP 42
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 270 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 389
V+ Y + +LG ACGK + V LA+ +PGDS+I+ L E
Sbjct: 57 VYAYQSSGRDLGAACGKPFPVAALAVIEPGDSEIMALLRE 96
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 41.9 bits (94), Expect = 0.008
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 77 RKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKE 229
R+R + +N + + +GK LG K+T+K ++ G+ KLV++A N P E
Sbjct: 2 RRRENMDVNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIPKDLE 52
Score = 39.9 bits (89), Expect = 0.031
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 234 EIEYYALLAXTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
+++YYA L+ V+ + ++ELG CGK + V L + D G S+I+
Sbjct: 54 DVKYYAKLSNIPVYQHKITSLELGAVCGKPFPVAALLVLDEGLSNIM 100
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 41.1 bits (92), Expect = 0.014
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 270 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
V Y G ++ELG CGK + + +AI D G+SDI+
Sbjct: 65 VLEYEGTSVELGPVCGKPFTIAAMAILDAGESDIL 99
Score = 33.5 bits (73), Expect = 2.7
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 68 QRNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
+R + ++ L +K+GK +G +T+ G AK+V++A N P
Sbjct: 2 RRELMKMKINVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCP 51
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 39.5 bits (88), Expect = 0.042
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 98 LNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
L+ L V+++GK +G KQ +K ++G AKLVI+A N P
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCP 44
Score = 38.7 bits (86), Expect = 0.073
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 270 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
++ + G +++LG CGK Y V + + +PGDSDI+
Sbjct: 58 MYEFPGMSVDLGPICGKPYVVSAVTVLEPGDSDIM 92
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 38.7 bits (86), Expect = 0.073
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 270 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 374
VH N ELG ACGK + + T+ + D GDSD++
Sbjct: 58 VHQAPVVNRELGVACGKPFSISTICVLDAGDSDLL 92
Score = 32.3 bits (70), Expect = 6.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 98 LNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
L+ +L + +G G +QTL +G A+LV++A N P
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCP 42
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 37.9 bits (84), Expect = 0.13
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 101 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 217
N L MK+G+ LG K + + KA+LVIIAKNAP
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAP 42
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 270 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 389
++ + G++ +LG CG+ + + LAI + G+SDI++ E
Sbjct: 57 LYEFDGSSRQLGKECGRDHMISVLAIVNAGESDILSLKSE 96
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 35.5 bits (78), Expect = 0.68
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 110 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKEI 232
L++ ++GK G +T K + +G AKLV+IA++ PP+ +
Sbjct: 38 LSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVV 78
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 35.1 bits (77), Expect = 0.90
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 110 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 214
L L M++GK G + TLK +R KAK V +A++A
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDA 45
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 34.7 bits (76), Expect = 1.2
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 92 SQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 214
+++ S L L K+ K GY+ + L+ GKA+LVI+A++A
Sbjct: 4 NRIYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDA 44
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2
Query: 204 AMITSFALPCRRVFKVCLYPKQYFPDFITKARREL 100
A+ T+ P R+VF V LYP Y PD +T REL
Sbjct: 114 AINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSREL 148
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 33.5 bits (73), Expect = 2.7
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 95 QLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
++++ L L ++G+ G + +K ++ GKAKLV +A +A P
Sbjct: 5 KISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGP 46
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 33.5 bits (73), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 128 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 211
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 92 SQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
+ + S L L ++GK GY+ + LR K +LV++A++ P
Sbjct: 2 NNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSP 44
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 143 LGYKQTLKTLRQGKAKLVIIAKNA 214
+G KQTLK LR GKA VIIA +A
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDA 50
>UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein H6-type -
Cenarchaeum symbiosum
Length = 126
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 110 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKEI 232
L +SGK G + K + +G +KLV+IA++ PP+ +
Sbjct: 23 LRAATQSGKVKKGTNEATKAIERGTSKLVVIAEDVEPPEVV 63
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 32.7 bits (71), Expect = 4.8
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 125 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 220
+SGK G +T K + +G+AKLVIIA++ P
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP 59
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 32.3 bits (70), Expect = 6.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 110 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 214
L L++ +G Y + Y++T+K LR K + + KNA
Sbjct: 194 LGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNA 228
>UniRef50_UPI0000E46A01 Cluster: PREDICTED: similar to LOC402912
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC402912 protein -
Strongylocentrotus purpuratus
Length = 185
Score = 31.9 bits (69), Expect = 8.3
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 53 PKWLQQRNRKRPSSQLNSRLAL-VMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPPKE 229
P+W ++ +KR S+ ++R AL M+ +Y + Y++ K K + + A N PP +
Sbjct: 103 PEWGDEKTKKRRRSE-SARAALRAMRRNQYAIEYREEQKRRENLKTRRLRAAFNVSPPDD 161
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 31.9 bits (69), Expect = 8.3
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 80 KRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA 214
K ++ S L L ++GK G TL L++GK L++IA++A
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDA 46
>UniRef50_Q22UP2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1911
Score = 31.9 bits (69), Expect = 8.3
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 8 FHLXLLREDSLAFTLPKWLQQRNRKRPSSQLNSRLALVMKSGKYCLGYKQTLKTLRQGKA 187
F L +DS+ K +Q RK S QLN+ + + +Q TL Q +
Sbjct: 1235 FKQSSLNQDSVQQAKNKSEEQEGRKEQSQQLNT----IKEDNNESFSKEQEKNTLNQNQN 1290
Query: 188 KLVIIAKNAPPPKEI*D 238
V I +N P K++ D
Sbjct: 1291 DKVFIQENGQPQKQLID 1307
>UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
ZK686.1 - Caenorhabditis elegans
Length = 44
Score = 31.9 bits (69), Expect = 8.3
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 116 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 211
+VMK+G+Y L Y+Q LK+L AKLVI K+
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,617,519
Number of Sequences: 1657284
Number of extensions: 7140932
Number of successful extensions: 16075
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 15731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16074
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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