Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G23
         (425 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...   154   4e-38
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...   154   4e-38
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...   154   4e-38
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...   154   4e-38
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...   154   4e-38
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...   154   4e-38
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...   154   4e-38
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...   154   4e-38
AY051912-1|AAK93336.1|  801|Drosophila melanogaster LD39933p pro...    30   1.1  
AE014134-2350|AAF53302.2|  800|Drosophila melanogaster CG7110-PB...    30   1.1  
AY051494-1|AAK92918.1|  818|Drosophila melanogaster GH14774p pro...    28   4.5  
AF313621-1|AAL78208.1|  818|Drosophila melanogaster CTCF protein.      28   4.5  
AE014296-1240|AAF50573.2|  818|Drosophila melanogaster CG8591-PA...    28   4.5  

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score =  154 bits (374), Expect = 4e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = +3

Query: 39  SLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHSKFVRDLVREVVGHA 218
           ++ +E+A+GL KGHKT+KI   +     K   +R +RLK +QT+H+KF+RDLVREVVGHA
Sbjct: 2   AVRYELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHA 61

Query: 219 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELXNVLAQMRK 362
            YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREEL N+L Q+RK
Sbjct: 62  PYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109


>AY051912-1|AAK93336.1|  801|Drosophila melanogaster LD39933p
           protein.
          Length = 801

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 114 ITDKAIXIRPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 290
           +T   I  R  R   L+T   K + RDL++++      ++R++ELL+  K++R  + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327

Query: 291 RLGTHIRAKRKREEL 335
           RL   ++  +  E+L
Sbjct: 328 RLEAQLKTIQLEEQL 342


>AE014134-2350|AAF53302.2|  800|Drosophila melanogaster CG7110-PB
           protein.
          Length = 800

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +3

Query: 114 ITDKAIXIRPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 290
           +T   I  R  R   L+T   K + RDL++++      ++R++ELL+  K++R  + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327

Query: 291 RLGTHIRAKRKREEL 335
           RL   ++  +  E+L
Sbjct: 328 RLEAQLKTIQLEEQL 342


>AY051494-1|AAK92918.1|  818|Drosophila melanogaster GH14774p
           protein.
          Length = 818

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 21  SVRNHGSLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHS 176
           + R+  S A   ++ LR    T K +  +     KAI +RPAR    + K S
Sbjct: 119 ATRSVVSTATNKSINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170


>AF313621-1|AAL78208.1|  818|Drosophila melanogaster CTCF protein.
          Length = 818

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 21  SVRNHGSLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHS 176
           + R+  S A   ++ LR    T K +  +     KAI +RPAR    + K S
Sbjct: 119 ATRSVVSTATNKSINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170


>AE014296-1240|AAF50573.2|  818|Drosophila melanogaster CG8591-PA
           protein.
          Length = 818

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +3

Query: 21  SVRNHGSLAFEIAVGLRKGHKTTKISAGRKGITDKAIXIRPARLKGLQTKHS 176
           + R+  S A   ++ LR    T K +  +     KAI +RPAR    + K S
Sbjct: 119 ATRSVVSTATNKSINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,511,945
Number of Sequences: 53049
Number of extensions: 290476
Number of successful extensions: 785
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)