Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_G19
(446 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 220 1e-56
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 194 1e-48
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 149 4e-35
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 146 1e-34
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 144 8e-34
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 130 1e-29
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 125 4e-28
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 112 3e-24
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 111 9e-24
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 110 2e-23
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 96 4e-19
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 90 2e-17
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 83 3e-15
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 73 3e-12
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 68 1e-10
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 65 6e-10
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 63 2e-09
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 61 9e-09
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 61 9e-09
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 59 5e-08
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 57 2e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 53 2e-06
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 52 6e-06
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 47 2e-04
UniRef50_Q74MA1 Cluster: 30S ribosomal protein S17e; n=1; Nanoar... 46 4e-04
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 46 4e-04
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 46 5e-04
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 45 7e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 43 0.003
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 42 0.005
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 41 0.011
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 40 0.025
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 39 0.043
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 38 0.13
UniRef50_Q648S6 Cluster: Putative uncharacterized protein; n=1; ... 35 0.70
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 35 0.70
UniRef50_Q23FW6 Cluster: Putative uncharacterized protein; n=1; ... 34 1.2
UniRef50_Q6L0U7 Cluster: 30S ribosomal protein S17e; n=4; Thermo... 34 1.2
UniRef50_Q8SSJ2 Cluster: COATOMER COMPLEX; n=1; Encephalitozoon ... 31 8.6
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 220 bits (537), Expect = 1e-56
Identities = 106/124 (85%), Positives = 112/124 (90%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
LRHSQVRGISIKLQE ER RRDNYVP VSALE DIIEV DTK+MLK+LDF+NI GLQLT
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120
Query: 417 QPAT 428
QP T
Sbjct: 121 QPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 194 bits (472), Expect = 1e-48
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 149 bits (360), Expect = 4e-35
Identities = 72/121 (59%), Positives = 91/121 (75%)
Frame = +3
Query: 60 GRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL 239
G + TK KKA +IIEKY TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+
Sbjct: 3 GHICTKITKKATQVIIEKYCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRI 61
Query: 240 RHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQ 419
R VRGISIKLQE ER RDNYVP +S L+ + +EV PDTK+ML++LDF +++ LQ+T+
Sbjct: 62 RKGPVRGISIKLQEEERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTR 121
Query: 420 P 422
P
Sbjct: 122 P 122
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 146 bits (355), Expect = 1e-34
Identities = 70/128 (54%), Positives = 94/128 (73%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKK + +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR
Sbjct: 1 MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGIS+KLQE ER RR ++VP SALE + I V +T +ML L ++ G++
Sbjct: 61 IQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQ 120
Query: 417 QPATXGGY 440
Q + Y
Sbjct: 121 QEVSAPTY 128
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 144 bits (349), Expect = 8e-34
Identities = 69/107 (64%), Positives = 81/107 (75%)
Frame = +3
Query: 102 IIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQE 281
IIEKYYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQE
Sbjct: 71 IIEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQE 130
Query: 282 XERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 422
ER RRDNYVP SAL+ +IIEV PDTK ML + F ++ Q TQP
Sbjct: 131 EERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 130 bits (315), Expect = 1e-29
Identities = 61/112 (54%), Positives = 82/112 (73%)
Frame = +3
Query: 87 KAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGIS 266
KA + ++YYT L +F +NKR CEE II +K L NKI G+ HLM+R++ VRGIS
Sbjct: 65 KATQVFTDQYYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGIS 124
Query: 267 IKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 422
IKLQE ER R+DNYVP +SA + + IEV PDTK+M K+L+F +++ LQ+TQP
Sbjct: 125 IKLQEKERERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 125 bits (302), Expect = 4e-28
Identities = 58/106 (54%), Positives = 82/106 (77%)
Frame = +3
Query: 105 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEX 284
+ +Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQE
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE 113
Query: 285 ERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 422
E RR +Y+P VSAL+ +I EV P TK+MLK+LD +++ LQ+TQP
Sbjct: 114 E--RRADYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 112 bits (270), Expect = 3e-24
Identities = 55/108 (50%), Positives = 78/108 (72%)
Frame = +3
Query: 99 IIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 278
+I+EK+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V +
Sbjct: 64 VILEKHYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPV------AR 117
Query: 279 EXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 422
ER +++ YVP VSAL+ +IIEV PDT++MLK+LDF +++ LQ+TQP
Sbjct: 118 GGER-KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 111 bits (266), Expect = 9e-24
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG++RTKTVK+A+ ++EKYY++L DF NKR+ ++ I +K L+NKIAG+ TH+M+R
Sbjct: 1 MGKIRTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDI---IEVXPDTKDMLKMLD 386
L VRGIS+KLQE ER RR ++ P S ++ I + V T ML+ L+
Sbjct: 61 LARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 110 bits (264), Expect = 2e-23
Identities = 51/98 (52%), Positives = 72/98 (73%)
Frame = +3
Query: 84 KKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 263
+KAA ++IEKYY +LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GI
Sbjct: 50 RKAAKVLIEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGI 109
Query: 264 SIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLK 377
S+K+QE ER RR +YVP S+++ D + D K ML+
Sbjct: 110 SLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 95.9 bits (228), Expect = 4e-19
Identities = 50/115 (43%), Positives = 71/115 (61%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGR+ TK +KK A +I EKYY L DF +K +C+EI I ++ L +KIAG+ THLM+
Sbjct: 1 MGRICTKILKKVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKE 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNIN 401
+R S + +S R R NYVP S L+ +I EV TK+MLK+ F +++
Sbjct: 61 IRGSDSQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 89.8 bits (213), Expect = 2e-17
Identities = 43/107 (40%), Positives = 66/107 (61%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG VR K VK+AA I EKY+ RL FD N + +++A++ +K L+N+IAG+ T L ++
Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKK 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLK 377
+ + IK E ER R++N +P S L+ D +EV T +M+K
Sbjct: 61 ILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 83.0 bits (196), Expect = 3e-15
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG+VRTKT+K++A I KY+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 1 MGKVRTKTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKE 60
Query: 237 LRHSQVR----GISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNIN 401
+ + I + E +++ V + L+ ++++ +TK M+K L F N N
Sbjct: 61 FFKGKKKKIYTNIKFDINNIEINNKESEVFSNTELKLNLVD--DETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 72.9 bits (171), Expect = 3e-12
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGR+R +K+ A +I+KY T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+
Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQ 60
Query: 237 LR 242
L+
Sbjct: 61 LQ 62
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG VR+K VK+ A +++E+Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 1 MGNVRSKLVKRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYV 311
+ + R +S++ QE + Y+
Sbjct: 61 KKLIEQR-LSMR-QEITMTDEEEYI 83
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 65.3 bits (152), Expect = 6e-10
Identities = 33/68 (48%), Positives = 42/68 (61%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG+VR VK+ A I+EKY LT DF+ NK++ E +A TK LRN IAG+ THLMR
Sbjct: 1 MGKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRL 60
Query: 237 LRHSQVRG 260
+ G
Sbjct: 61 KERQREEG 68
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 63.3 bits (147), Expect = 2e-09
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +3
Query: 213 FATHLMRRLRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFN 392
F HLMRR++ VRGIS+KLQE ER RR ++VP S ++ +I+V DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 61.3 bits (142), Expect = 9e-09
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +3
Query: 21 DSCQKQRCTTSAMGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRN 200
+ CQ MG + KT KKAA +I EK YT L+ D K +C+EI I P+K L
Sbjct: 6 NKCQALLQRPVIMGYICIKTGKKAAWVITEKNYTGLSNDLHNKKDLCKEIIIFPSKKL-Y 64
Query: 201 KIAGFATHLMRRL-RHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXP 356
KIAGF LM+++ R+ +++ +S L ER +D V L+ +++ P
Sbjct: 65 KIAGFVMRLMKQIQRNYKLQELSSSL-AAERISKDIVCQNVGFLQINMLMSEP 116
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 61.3 bits (142), Expect = 9e-09
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 230
MG +RT VK+ A +IE + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 1 MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 58.8 bits (136), Expect = 5e-08
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG+VR VK+ A ++E Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 1 MGKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRL 60
Query: 237 LRHSQVRGISIKLQEXERXR 296
+ + I+ Q E R
Sbjct: 61 YKRTGELQYLIEQQHAEEFR 80
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 230
MG+VR + VK+ A ++EKY T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 1 MGKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 53.2 bits (122), Expect = 2e-06
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +3
Query: 318 VSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 422
VSAL+ ++IEV PDTK+MLK+LDF +++ LQ+TQP
Sbjct: 327 VSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 52.0 bits (119), Expect = 6e-06
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG +R +K+ A +IE Y T DF+TNK + + I +K +RN++AG+ T + R
Sbjct: 1 MGNIRETNIKRTAFSLIENYGEVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVAR 60
Query: 237 LR 242
++
Sbjct: 61 MK 62
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG V+ +K A +++KY T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 1 MGTVKPAYIKVIARELLKKYPEVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q74MA1 Cluster: 30S ribosomal protein S17e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17e -
Nanoarchaeum equitans
Length = 72
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 233
MGRV+ K VK+ A + ++Y T DF+ NK++ + + +K RN+IAG+ L++
Sbjct: 1 MGRVKIKVVKRTALELFKRYPDIWTKDFEKNKKLVQALLKKVSKKFRNQIAGYLVRLVK 59
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 66 VRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 230
++ VKK +++E+Y DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 3 IKPAYVKKTGTLLMERYPDAFGADFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 230
MG +R +K ++ +Y DF NK E++A + TK +RN+IAG+ T M
Sbjct: 1 MGSIRQTYIKSTTDALLRQYPNEFGSDFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 45.2 bits (102), Expect = 7e-04
Identities = 18/59 (30%), Positives = 37/59 (62%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 233
MG V TK +K+ A + +K+ + + +D NK++ +E + +K ++N+IAG+ T ++
Sbjct: 1 MGNVYTKDIKRVARELYDKFKDQASDKYDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVK 59
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 135 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 224
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 224
MG V+ VKK A ++ K T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 1 MGTVKPTYVKKLAKQLL-KEVAECTDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/52 (30%), Positives = 36/52 (69%)
Frame = +3
Query: 81 VKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
+K+ + ++E + ++ DF NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 4 IKRLSYEVLETHKSKFGEDFADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 41.1 bits (92), Expect = 0.011
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 66 VRTKTVKKAAXIIIEKYYTRLTL-DFDTNKRICEEIAIIPTKPLRNKIAGFATH 224
++ VKK I++E+Y + DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 3 IKPDYVKKTGNILMERYQDAFSREDFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 39.9 bits (89), Expect = 0.025
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 51 SAMGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 230
S MG V+ +K A ++ Y T DF+ NK + K +RN+IAG+ T ++
Sbjct: 13 SWMGCVKPSYIKNFAKKLLSTYEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRIL 72
Query: 231 RR 236
+
Sbjct: 73 EQ 74
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 39.1 bits (87), Expect = 0.043
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 66 VRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFAT 221
++ +K ++E++ +FD NK++ EI I +K +RN++AG+ T
Sbjct: 3 IKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 37.5 bits (83), Expect = 0.13
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = -2
Query: 223 CVANPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIXFAAFLTVLVRTRP 59
CV PAILFL L+ SS LF SKSSV+ F+ FA+F T + T P
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFNSC-FASFFTYVGLTVP 71
>UniRef50_Q648S6 Cluster: Putative uncharacterized protein; n=1;
uncultured archaeon GZfos37B2|Rep: Putative
uncharacterized protein - uncultured archaeon GZfos37B2
Length = 76
Score = 35.1 bits (77), Expect = 0.70
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 215
MG +R +KK A +IE DF+ NK + I +K +RN++AG+
Sbjct: 10 MGNIRPTYIKKIAKELIETRGYAFGTDFEANKVQVAKHTDITSKTIRNRVAGY 62
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 35.1 bits (77), Expect = 0.70
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +3
Query: 81 VKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 224
+KK +++ + + L F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 55 IKKHTEELLKNHKSEFGLSFEENKKTLERLSTIRYKILKNEIAGYITN 102
>UniRef50_Q23FW6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1104
Score = 34.3 bits (75), Expect = 1.2
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 6 LSLLFDSCQKQRCTTSAMGRVRTKTVKKAAXIIIEKYYTRLTLDFDT 146
L LL SCQK M +K V+K I++E+YYT LT D +T
Sbjct: 333 LDLLVPSCQKSDLINLMMLLHSSKIVQKTQ-ILLEEYYTHLTEDINT 378
>UniRef50_Q6L0U7 Cluster: 30S ribosomal protein S17e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S17e -
Picrophilus torridus
Length = 76
Score = 34.3 bits (75), Expect = 1.2
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEE-IAIIPTKPLRNKIAGFATHLMR 233
MG +R +K+ A I++ DF+ NK+I E + TK N IAG+ T +
Sbjct: 1 MGSIRPSNIKRIAEEIVDNNPGIFNEDFENNKKILSEMLKNSVTKKTMNAIAGYVTRYIL 60
Query: 234 RLRHSQ 251
+ + +
Sbjct: 61 KKKSKE 66
>UniRef50_Q8SSJ2 Cluster: COATOMER COMPLEX; n=1; Encephalitozoon
cuniculi|Rep: COATOMER COMPLEX - Encephalitozoon cuniculi
Length = 983
Score = 31.5 bits (68), Expect = 8.6
Identities = 27/114 (23%), Positives = 50/114 (43%)
Frame = +3
Query: 63 RVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 242
R+R KT I++ KY++ L L+ + + + A++ + +N A L L+
Sbjct: 860 RIRRKTESPLKNIMMAKYFSDLPLERE-HHILASSTAVMVFR--KNGNLKQAKELAMSLK 916
Query: 243 HSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNING 404
+I+ E+ D Y HD++E+ P+ K L + N+ NG
Sbjct: 917 SDGKCSKAIEKAAEEKDPEDRYELPKGVFCHDVLEIRPNAKTCL-LCFVNSSNG 969
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,095,781
Number of Sequences: 1657284
Number of extensions: 5965321
Number of successful extensions: 14267
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 13987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14262
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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