Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G19
         (446 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            147   4e-36
10_07_0174 + 13815478-13815903                                        146   7e-36
06_01_0889 - 6807449-6809257                                           28   3.9  
01_01_0425 + 3221303-3222602,3222710-3222928,3223010-3223114,322...    27   5.2  
03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542     27   6.9  

>03_01_0066 - 537729-538163
          Length = 144

 Score =  147 bits (356), Expect = 4e-36
 Identities = 72/122 (59%), Positives = 94/122 (77%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKTVKK +  +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR
Sbjct: 1   MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           ++   VRGIS+KLQE ER RR ++VP  SALE D I V  +T DML  L   ++ G+ + 
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VR 119

Query: 417 QP 422
           QP
Sbjct: 120 QP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  146 bits (354), Expect = 7e-36
 Identities = 70/128 (54%), Positives = 94/128 (73%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKTVKK +  +IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR
Sbjct: 1   MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           ++   VRGIS+KLQE ER RR ++VP  SALE + I V  +T +ML  L   ++ G++  
Sbjct: 61  IQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQ 120

Query: 417 QPATXGGY 440
           Q  +   Y
Sbjct: 121 QEVSAPTY 128


>06_01_0889 - 6807449-6809257
          Length = 602

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 237 LRHSQVRGI-SIKLQEXERXRRDNYVPXVSALEHDIIE 347
           LRH Q R I ++ +    R R + YVP      HD+ E
Sbjct: 487 LRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAE 524


>01_01_0425 +
           3221303-3222602,3222710-3222928,3223010-3223114,
           3223274-3223403,3223524-3224464,3224971-3225257
          Length = 993

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 442 P*PPWVAGCVSCRPLILLKSSIF 374
           P PPW+  C S   L+L   S +
Sbjct: 387 PIPPWIRNCTSLESLVLFNCSFY 409


>03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542
          Length = 138

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 445 PP*PPWVAGCVSCRP 401
           PP PP   GC SCRP
Sbjct: 97  PPPPPCCPGCNSCRP 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,850,088
Number of Sequences: 37544
Number of extensions: 151169
Number of successful extensions: 382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)