Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G19
         (446 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   210   2e-56
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   4.9  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  210 bits (513), Expect = 2e-56
 Identities = 102/126 (80%), Positives = 111/126 (88%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKT+KKA+ +IIEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+R
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           LRHSQVRGISIKLQE ER RRDNYVP VSALE DIIEV P+TK+MLK LDFNNI  +QLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLT 119

Query: 417 QPATXG 434
            P   G
Sbjct: 120 NPTAPG 125


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 294 RRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNI 398
           R D Y   ++ L H    V  D   ++  LDF NI
Sbjct: 208 RSDGYQLGITVLSHVNSSVFMDIPAIINYLDFVNI 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,869
Number of Sequences: 2352
Number of extensions: 6406
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)