Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_G19
(446 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 194 2e-49
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 194 2e-49
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 194 2e-49
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 194 2e-49
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 169 5e-42
M71246-1|AAA52713.1| 176|Homo sapiens interferon-alpha protein. 29 7.2
M38289-1|AAA59165.1| 189|Homo sapiens IFNA protein. 29 7.2
M81886-1|AAA58395.1| 906|Homo sapiens glutamate receptor type 1... 29 9.5
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 194 bits (472), Expect = 2e-49
Identities = 91/122 (74%), Positives = 106/122 (86%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MGRVRTKTVKKAA +IIEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE ER RRDNYVP VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 169 bits (410), Expect = 5e-42
Identities = 79/122 (64%), Positives = 97/122 (79%)
Frame = +3
Query: 57 MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
MG V TKT+KKAA +IIEKYY L DF TNK +C+EIAIIP+K L NK AG+ THLM++
Sbjct: 1 MGHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQ 60
Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
++ VRGISIKLQE R RRDNYVP +SAL+ +IIEV PDTK+MLK+LDF ++ LQ+T
Sbjct: 61 IQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVT 120
Query: 417 QP 422
QP
Sbjct: 121 QP 122
>M71246-1|AAA52713.1| 176|Homo sapiens interferon-alpha protein.
Length = 176
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 36 QRCTTSAMGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 215
+ C +G T + + + + + KY+ R+TL K ++ + +R+ F
Sbjct: 107 EACVIQEVGMEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRS--LSF 164
Query: 216 ATHLMRRLR 242
+T+L +RLR
Sbjct: 165 STNLQKRLR 173
>M38289-1|AAA59165.1| 189|Homo sapiens IFNA protein.
Length = 189
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 36 QRCTTSAMGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 215
+ C +G T + + + + + KY+ R+TL K ++ + +R+ F
Sbjct: 120 EACVIQEVGMEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRS--LSF 177
Query: 216 ATHLMRRLR 242
+T+L +RLR
Sbjct: 178 STNLQKRLR 186
>M81886-1|AAA58395.1| 906|Homo sapiens glutamate receptor type 1
protein.
Length = 906
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 210 GFATHLMRRLRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDII 344
G + R L+ + G++ +Q E+ RR NY V ++HD I
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDSI 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,449,279
Number of Sequences: 237096
Number of extensions: 830569
Number of successful extensions: 2559
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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