Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G19
         (446 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   219   1e-57
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   219   1e-57
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   219   1e-57
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   219   1e-57
AY058680-1|AAL13909.1|  305|Drosophila melanogaster LD39460p pro...    27   8.7  
AE013599-2012|AAF58169.2|  305|Drosophila melanogaster CG7544-PA...    27   8.7  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  219 bits (536), Expect = 1e-57
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKTVKKAA +IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           LRHSQVRGISIKLQE ER RRDNYVP VSALE DIIEV  DTK+MLK+LDF+NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 417 QPAT 428
           QP T
Sbjct: 121 QPNT 124


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  219 bits (536), Expect = 1e-57
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKTVKKAA +IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           LRHSQVRGISIKLQE ER RRDNYVP VSALE DIIEV  DTK+MLK+LDF+NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 417 QPAT 428
           QP T
Sbjct: 121 QPNT 124


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  219 bits (536), Expect = 1e-57
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKTVKKAA +IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           LRHSQVRGISIKLQE ER RRDNYVP VSALE DIIEV  DTK+MLK+LDF+NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 417 QPAT 428
           QP T
Sbjct: 121 QPNT 124


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  219 bits (536), Expect = 1e-57
 Identities = 106/124 (85%), Positives = 112/124 (90%)
 Frame = +3

Query: 57  MGRVRTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 236
           MGRVRTKTVKKAA +IIEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1   MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60

Query: 237 LRHSQVRGISIKLQEXERXRRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLT 416
           LRHSQVRGISIKLQE ER RRDNYVP VSALE DIIEV  DTK+MLK+LDF+NI GLQLT
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120

Query: 417 QPAT 428
           QP T
Sbjct: 121 QPNT 124


>AY058680-1|AAL13909.1|  305|Drosophila melanogaster LD39460p
           protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = +3

Query: 33  KQRCTTSAMGRVRT-----KTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLR 197
           +Q+C     G+V       KT+++   +++++YY  L +DF          +++PT  LR
Sbjct: 36  RQQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYD-LDVDFAPG-------SLVPTLALR 87

Query: 198 NKIAGFATHLMRRLRHSQVRGISI 269
                +   LM  L    +RGI I
Sbjct: 88  LNYILWLEDLMEPLNLQNIRGIDI 111


>AE013599-2012|AAF58169.2|  305|Drosophila melanogaster CG7544-PA
           protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
 Frame = +3

Query: 33  KQRCTTSAMGRVRT-----KTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLR 197
           +Q+C     G+V       KT+++   +++++YY  L +DF          +++PT  LR
Sbjct: 36  RQQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYD-LDVDFAPG-------SLVPTLALR 87

Query: 198 NKIAGFATHLMRRLRHSQVRGISI 269
                +   LM  L    +RGI I
Sbjct: 88  LNYILWLEDLMEPLNLQNIRGIDI 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,658,415
Number of Sequences: 53049
Number of extensions: 266880
Number of successful extensions: 643
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)