Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G16
         (368 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    77   3e-16
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   1.6  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   4.8  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   4.8  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   4.8  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           22   8.4  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 76.6 bits (180), Expect = 3e-16
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +2

Query: 143 SRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 259
           SR  R+CSN HG+IRKYGLNICRQCFREYA DIGF+KLD
Sbjct: 18  SRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56



 Score = 30.3 bits (65), Expect = 0.024
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 90  MGHANIWYSHPRQ 128
           MG AN+WYSHPR+
Sbjct: 1   MGFANLWYSHPRK 13


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +1

Query: 73  NFNFLKWATQIFGILTLARYGQGISVMPILLQQA 174
           ++  L   T I G++ ++  G G S +P+L+Q++
Sbjct: 21  SYPILNGHTTIQGLIEMSTSGSGSSGLPLLVQRS 54


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 PILLQQAWLNPQVRFEHMQTVL 219
           P+LL +A LNP+   E M  ++
Sbjct: 103 PVLLTEAPLNPKANREKMTQIM 124


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 PILLQQAWLNPQVRFEHMQTVL 219
           P+LL +A LNP+   E M  ++
Sbjct: 103 PVLLTEAPLNPKANREKMTQIM 124


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 PILLQQAWLNPQVRFEHMQTVL 219
           P+LL +A LNP+   E M  ++
Sbjct: 103 PVLLTEAPLNPKANREKMTQIM 124


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 154 PILLQQAWLNPQVRFEHMQTVL 219
           P+LL +A LNP+   E M  ++
Sbjct: 103 PVLLTEAPLNPKSNREKMTQIM 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,102
Number of Sequences: 2352
Number of extensions: 5867
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)