Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G14
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   1.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   4.3  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 75  CKKSLGIKLILRDKNKFCVIQFRL 4
           C K++G+K I        VI++R+
Sbjct: 152 CGKNIGMKRIFTSSQNIAVIEYRI 175


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 430 DLFNFNAFSDNIGLSTWLLVKCTGGKT 350
           +LF+   F+ NI  ST LL K  GG +
Sbjct: 106 ELFDATVFTYNITNSTPLLKKLYGGNS 132


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 69  SCKSNAIKCLKCRTKLIDDISLITNQN 149
           S  +  ++CL+   ++I D   I +QN
Sbjct: 805 SINNQGLECLRFLNEVISDFDAILDQN 831


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,596
Number of Sequences: 438
Number of extensions: 2510
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)