Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_G10
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   144   4e-35
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   116   2e-26
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    29   3.8  
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    27   8.8  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  144 bits (350), Expect = 4e-35
 Identities = 78/157 (49%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
 Frame = +3

Query: 192 VGKAP-AANLPHVLRWYNQIASYTSAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXX 362
           +G AP A+  P+V RWY  +ASYT AERKTW+   G++P                     
Sbjct: 40  LGSAPNASTYPNVARWYANVASYTDAERKTWASAGGSAPAAAAADGDDF----------- 88

Query: 363 VDLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMEN 542
            DLFGS                L AYA+KK+KK   IAKSS++LDVKPWDDETD+ EME 
Sbjct: 89  -DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEK 147

Query: 543 QVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDK 653
            VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED K
Sbjct: 148 LVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLK 184


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  116 bits (278), Expect = 2e-26
 Identities = 56/96 (58%), Positives = 67/96 (69%)
 Frame = +3

Query: 366 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 545
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 546 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDK 653
           VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED K
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLK 234


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 483 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 608
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 LQTCACWVWHK*TANYVCH 640
           LQ CA W+WHK   NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 LQTCACWVWHK*TANYVCH 640
           LQ CA W+WHK   NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,239,305
Number of Sequences: 27780
Number of extensions: 243419
Number of successful extensions: 660
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)