Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_F24
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   180   4e-47
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   2.8  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     24   3.8  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   8.7  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  180 bits (437), Expect = 4e-47
 Identities = 85/128 (66%), Positives = 92/128 (71%)
 Frame = +2

Query: 128 DKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHXLPRYGVKVGLTNYAAXY 307
           DKNKYNTPK+RLIVRLSN+D+TCQ+AY RIEGD IVCAAYSH LPRYGVKVGLTNYAA Y
Sbjct: 40  DKNKYNTPKFRLIVRLSNRDITCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAY 99

Query: 308 STGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLXRTTTGARV 487
            TG                          EY VEPVD GP AFRCYLDVGL RTTTG+RV
Sbjct: 100 CTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRV 159

Query: 488 FGAIKGVL 511
           FGA+KG +
Sbjct: 160 FGAMKGAV 167



 Score = 75.4 bits (177), Expect = 1e-15
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1

Query: 10  MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
           MGFVKVV NKQYFKRYQV+F+RRREGKTDYYARKRL
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRL 36



 Score = 31.1 bits (67), Expect = 0.025
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 502 RXAVDGGLNVPHSIK 546
           + AVDGGLN+PHS+K
Sbjct: 164 KGAVDGGLNIPHSVK 178


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 354 LTPYTLAQQMSXVMNTMLNLSTMDHXHL 437
           LTP   + +M  +  TML ++T  H HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 266 NVAXHVNKQRTQYGHLQSESRPPGML 189
           +V    +KQ  +Y H   E +PPG L
Sbjct: 146 SVQGGASKQALKYYHYYLEGQPPGQL 171


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 457 AYIQITSKCXWSIVDRF 407
           A I   + C W+++DRF
Sbjct: 307 ALIAAVAACLWAVLDRF 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,812
Number of Sequences: 2352
Number of extensions: 9864
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)