Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_F15
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 97 9e-21
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 94 5e-20
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 33 0.12
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 33 0.12
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 29 1.5
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 6.0
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 96.7 bits (230), Expect = 9e-21
Identities = 54/112 (48%), Positives = 65/112 (58%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAXKLKKVITELNGKDVEQLIAAGRE 261
MRYV+AYLLAVLGG P D++ ILS+VG++ADA K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEKKXDKKXXXKEXSESDDDMGFGLFD 417
L S+ G + K KK KE ESDDDMGFGLFD
Sbjct: 61 GLVSVSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKE--ESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 94.3 bits (224), Expect = 5e-20
Identities = 51/112 (45%), Positives = 65/112 (58%)
Frame = +1
Query: 82 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAXKLKKVITELNGKDVEQLIAAGRE 261
M+Y+ AYLLA LGG +P+A DV K+L + G++ D V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 262 KLSSMPVGGGXXXXXXXXXXXXXXXEEKKXDKKXXXKEXSESDDDMGFGLFD 417
KLSS+P GG EEK KK KE ESDDDMGFGLFD
Sbjct: 61 KLSSVPSGGSAPAAAAPSGGAAPKAEEK---KKEEPKE--ESDDDMGFGLFD 107
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +1
Query: 217 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEKKXDKKXXXKEXSESDDD 396
L G DV+ LI + S P +KK + K ESDDD
Sbjct: 51 LEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPK------EESDDD 104
Query: 397 MGFGLFD 417
MGFGLFD
Sbjct: 105 MGFGLFD 111
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +1
Query: 217 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEKKXDKKXXXKEXSESDDD 396
L G DV+ LI + S P +KK + K ESDDD
Sbjct: 51 LEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPK------EESDDD 104
Query: 397 MGFGLFD 417
MGFGLFD
Sbjct: 105 MGFGLFD 111
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +1
Query: 355 KKXXXKEXSESDDDMGFGLFD 417
KK KE ESDDDMGFGLFD
Sbjct: 294 KKEEPKE--ESDDDMGFGLFD 312
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 127 TTPAAADVEKILSSVGIEADAXKLKKVITEL-NGKDVEQLI 246
+TPA+A +I + GI K+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 127 TTPAAADVEKILSSVGIEADAXKLKKVITEL-NGKDVEQLI 246
+TPA+A +I + GI K+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 242 SCSTSLPLSSVITFLSXSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 66
S +T+ P ++T + S S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVVPVS---SAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 242 SCSTSLPLSSVITFLSXSASASIPTELRIFSTSAAAGVVLPPSTASKYA 96
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,461,151
Number of Sequences: 27780
Number of extensions: 126182
Number of successful extensions: 434
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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