Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_F09
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 122 6e-29
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 52 1e-07
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 51 2e-07
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 51 2e-07
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 50 4e-07
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 50 4e-07
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 49 7e-07
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 47 3e-06
SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 30 0.34
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 1.8
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 27 1.8
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 26 4.1
SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 26 4.1
SPAC56F8.08 |mud1|ucp1, ddi1|UBA domain protein Mud1|Schizosacch... 26 4.1
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 26 5.5
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 5.5
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 25 7.2
SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 9.5
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 25 9.5
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 122 bits (293), Expect = 6e-29
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 13/201 (6%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M +T K LQQQ F I D K +LK +++ +++ + Q+LIY+G+IL DD +
Sbjct: 1 MNLTFKNLQQQKFVIS-DVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGE 59
Query: 258 YNIXEKKFIVIMVTKPKGSESQPTSTSIPEAGESASTDSGDXXXXXXXXXXXXXXXXXXX 437
YNI E+ FIV MV++PK S S P S + P AS
Sbjct: 60 YNIKEQDFIVCMVSRPKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVA 119
Query: 438 XRVTETPNT--TSDAELXA-----------TIQSIMDMGYDRPQVEQALRASFNNTXRAV 578
P+T TS+A + A ++++++MGY+R +VE+A+RA+FNN RAV
Sbjct: 120 AAAPSNPDTTATSEAPIDANTLAVGAQRNVAVENMVEMGYERSEVERAMRAAFNNPDRAV 179
Query: 579 QYLITGIPEXLLHEQEAEQSS 641
+YL+TGIPE +L+ Q E ++
Sbjct: 180 EYLLTGIPEDILNRQREESAA 200
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
ML+ +KTL + +++IDP + V +K ++E ++G QRLIYAGK + DD S
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEG--IPPSQQRLIYAGKQMADDKNAES 58
Query: 258 YNIXEKKFIVIMVTKPKGS 314
Y++ + +++ GS
Sbjct: 59 YHLEGGSVLHLVLALRGGS 77
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKGSESQPT 329
YNI +K+ + +V + +G +P+
Sbjct: 59 YNI-QKESTLHLVLRLRGGIIEPS 81
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKGSESQPT 329
YNI +K+ + +V + +G +P+
Sbjct: 59 YNI-QKESTLHLVLRLRGGIIEPS 81
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 49.6 bits (113), Expect = 4e-07
Identities = 26/86 (30%), Positives = 49/86 (56%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKGSESQPTST 335
YNI ++ + +++ G + + T
Sbjct: 59 YNIQKESTLHLVLRLRGGGKKRKKKT 84
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 49.6 bits (113), Expect = 4e-07
Identities = 26/86 (30%), Positives = 49/86 (56%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKGSESQPTST 335
YNI ++ + +++ G + + T
Sbjct: 59 YNIQKESTLHLVLRLRGGGKKRKKKT 84
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 59 YNI-QKESTLHLVLRLRG 75
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 135 YNI-QKESTLHLVLRLRG 151
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 211 YNI-QKESTLHLVLRLRG 227
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 287 YNI-QKESTLHLVLRLRG 303
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T+ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 363 YNI-QKESTLHLVLRLRG 379
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +3
Query: 84 VTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYN 263
+T+K Q + + +D E +V ALK I D + QRLIYAG++L D+ + +Y
Sbjct: 6 LTIKAANDQKYAVTVDSESSVLALKEAIAPVA--DIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 264 IXEKKFIVIMVTKPKGSESQPTSTS 338
I + I ++ T + + T+ S
Sbjct: 64 IQDGHSIHLVKTLGQNPAAAATNVS 88
>SPAC23C4.17 |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 674
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 228 ILLDDNKINSYNIXEKKFIVIMVTKPKGSESQPTSTSIPEAGESASTDSGD 380
+L + INS + KK+ M P ++ Q T + EA S T SG+
Sbjct: 426 VLQKTDPINSRSFDPKKYTASMEILPPENKRQRTEKGVDEASNSTLTKSGN 476
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +3
Query: 93 KTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLI---YAGKILLDDNKINSY- 260
K Q+ + IDPE + + ++KG D +AD + + +I++ I+ Y
Sbjct: 1421 KRSAQEWANLNIDPEADLLIFVGRWTLQKGIDLIADITPTLLENFNSQIVVVGPVIDLYG 1480
Query: 261 NIXEKKFIVIMVTKPKGSESQPTSTSIP 344
+KF +M P S+P T +P
Sbjct: 1481 KFAAEKFTALMKKYPGRIYSRPLFTQLP 1508
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 492 IQSIMDMGYDRPQVEQALRASFNNTXRAVQYLITGIPEXLLHEQEAEQS 638
+QS+ + G+ Q + L S NN RAV +++ P+ E E S
Sbjct: 645 VQSLCEFGFTVAQARKGLLESNNNIERAVDWILNH-PDESFEEPPLEGS 692
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 303 PKGSESQPTSTSIPEAGESASTDS 374
P + S PT+ S P AGE AS D+
Sbjct: 252 PDSNTSTPTTRSEPLAGEGASIDA 275
>SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase
[UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 111 TFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYNIXEKKF 281
TF I IDPE+ ALK + KD +A +R + K+++ ++++ +KF
Sbjct: 253 TFPIGIDPEKFSDALKSDVV----KDRIASIERRLQGVKVIVGVDRLDYIKGVPQKF 305
>SPAC56F8.08 |mud1|ucp1, ddi1|UBA domain protein
Mud1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 459 NTTSDAELXATIQSIMDMGYDRPQVEQALRASFNNTXRAVQYLI 590
N +D L + I ++ MG+D + QAL A+ + A +L+
Sbjct: 289 NPPTDPGLNSKIAQLVSMGFDPLEAAQALDAANGDLDVAASFLL 332
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 444 VTETPNTTSDAELXATIQSIMDMGYDRPQVEQALRASFNNTXRAV 578
VT+TP +++ A Q I + + PQV S NNT +V
Sbjct: 273 VTKTPLEEANSSPAAQNQHITTVDHVHPQVSMTPSLSTNNTATSV 317
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 30 VAQLTESSNILTKSVKMLVTLKTLQQQTFQIEIDPEETVKALKL 161
V Q+ +S T + TLKT++Q TF+ + +V+ALKL
Sbjct: 357 VVQMLQSKLADTDEKVRVATLKTIEQLTFE-TFKMQFSVQALKL 399
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 453 TPNTTSDAELXATIQSIMDMGYDRPQVEQALRASFNNTXRAVQYL 587
T +TS + + I S + YD +Q++ A NN +V ++
Sbjct: 674 TEESTSSSSFSSLITSPASLQYDENPFKQSVVAELNNNSSSVPFV 718
>SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 157
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 183 SLFPLQFLTSMLSQFLLDLFQFEMFAVVKFLASP--TFLHFSLI 58
S PL+ T +++ F L F + +V F ASP TF FSL+
Sbjct: 55 SSIPLEKHTFLVTNFTLRGIDFFVDTIVGFPASPETTFKVFSLL 98
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 300 KPKGSESQPTSTSIPEAGESASTDS 374
KPK ++S+P S P+A E+A S
Sbjct: 191 KPKPAKSEPVKQSKPKATETARPSS 215
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,255,066
Number of Sequences: 5004
Number of extensions: 40439
Number of successful extensions: 154
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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