Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_F09
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     53   7e-09
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.8  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   6.4  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 53.2 bits (122), Expect = 7e-09
 Identities = 28/78 (35%), Positives = 50/78 (64%)
 Frame = +3

Query: 78  MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
           M + +KTL  +T  +E++P +T++ +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58

Query: 258 YNIXEKKFIVIMVTKPKG 311
           YNI +K+  + +V + +G
Sbjct: 59  YNI-QKESTLHLVLRLRG 75



 Score = 53.2 bits (122), Expect = 7e-09
 Identities = 28/78 (35%), Positives = 50/78 (64%)
 Frame = +3

Query: 78  MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
           M + +KTL  +T  +E++P +T++ +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134

Query: 258 YNIXEKKFIVIMVTKPKG 311
           YNI +K+  + +V + +G
Sbjct: 135 YNI-QKESTLHLVLRLRG 151



 Score = 53.2 bits (122), Expect = 7e-09
 Identities = 28/78 (35%), Positives = 50/78 (64%)
 Frame = +3

Query: 78  MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
           M + +KTL  +T  +E++P +T++ +K KI+ ++G     D QRLI+AGK L D   ++ 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210

Query: 258 YNIXEKKFIVIMVTKPKG 311
           YNI +K+  + +V + +G
Sbjct: 211 YNI-QKESTLHLVLRLRG 227


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 508 IWDMIGHKLNKHYAPHLIIXKELYNI 585
           + ++IG+ LN +Y P L++   + NI
Sbjct: 33  VMELIGNFLNFYYMPLLVVVGSIGNI 58


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 648 LHQNFVQLLVHVAIXQEYLLLNIVQ 574
           LH+  V+ +  V I Q+  LLN+++
Sbjct: 187 LHEQIVRFVYRVTIYQDQRLLNLMR 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,305
Number of Sequences: 2352
Number of extensions: 9211
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)