Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_F09
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 52 4e-07
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 52 4e-07
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 51 8e-07
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 51 8e-07
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 50 1e-06
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 43 2e-04
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 36 0.019
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 36 0.019
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 31 0.54
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 31 0.54
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 31 0.71
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 3.8
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z22181-3|CAA80181.3| 416|Caenorhabditis elegans Hypothetical pr... 28 5.0
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 95.1 bits (226), Expect = 4e-20
Identities = 61/200 (30%), Positives = 99/200 (49%)
Frame = +3
Query: 51 SNILTKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKI 230
S I + + + VT +TL Q F +E++ ++T+ +K + EKG D+ + Q+LIY GKI
Sbjct: 43 SFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKI 102
Query: 231 LLDDNKINSYNIXEKKFIVIMVTKPKGSESQPTSTSIPEAGESASTDSGDXXXXXXXXXX 410
L D K+ KF+V+M++K K +E P+ST + A E +
Sbjct: 103 LDDSVKVGEVGFDSSKFVVVMLSKRKVTEVAPSST-VATAAEPVPVAAAPASNPAPAADV 161
Query: 411 XXXXXXXXXXRVTETPNTTSDAELXATIQSIMDMGYDRPQVEQALRASFNNTXRAVQYLI 590
E T + E + +I MGYDR Q ALRA+F N RAV++L+
Sbjct: 162 APEAAAP-----AEAEALTDEQE--ENVLAITGMGYDREQTIAALRAAFWNPDRAVEFLL 214
Query: 591 TGIPEXLLHEQEAEQSSDED 650
G+P+ +QE + +++
Sbjct: 215 NGLPDDAA-DQEPDLGPEQN 233
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKGSESQPT 329
YNI +K+ + +V + +G +P+
Sbjct: 59 YNI-QKESTLHLVLRLRGGIIEPS 81
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKGSESQPT 329
YNI +K+ + +V + +G +P+
Sbjct: 59 YNI-QKESTLHLVLRLRGGIIEPS 81
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 818
Query: 258 YNIXEKKFIVIMVTKPKGSE 317
YNI +K+ + +V + +G +
Sbjct: 819 YNI-QKESTLHLVLRLRGGD 837
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 59 YNI-QKESTLHLVLRLRG 75
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 135 YNI-QKESTLHLVLRLRG 151
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 211 YNI-QKESTLHLVLRLRG 227
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 287 YNI-QKESTLHLVLRLRG 303
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 363 YNI-QKESTLHLVLRLRG 379
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 514
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 515 YNI-QKESTLHLVLRLRG 531
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 590
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 591 YNI-QKESTLHLVLRLRG 607
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 666
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 667 YNI-QKESTLHLVLRLRG 683
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 742
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 743 YNI-QKESTLHLVLRLRG 759
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 439 YNI-QKESTLHLVLRLRG 455
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 818
Query: 258 YNIXEKKFIVIMVTKPKGSE 317
YNI +K+ + +V + +G +
Sbjct: 819 YNI-QKQSTLHLVLRLRGGD 837
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 59 YNI-QKESTLHLVLRLRG 75
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 135 YNI-QKESTLHLVLRLRG 151
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 211 YNI-QKESTLHLVLRLRG 227
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 287 YNI-QKESTLHLVLRLRG 303
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 363 YNI-QKESTLHLVLRLRG 379
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 439 YNI-QKESTLHLVLRLRG 455
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 514
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 515 YNI-QKESTLHLVLRLRG 531
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 590
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 591 YNI-QKESTLHLVLRLRG 607
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 666
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 667 YNI-QKESTLHLVLRLRG 683
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 742
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 743 YNI-QKESTLHLVLRLRG 759
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 59 YNI-QKESTLHLVLRLRG 75
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 135 YNI-QKESTLHLVLRLRG 151
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 211 YNI-QKESTLHLVLRLRG 227
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 287 YNI-QKESTLHLVLRLRG 303
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 363 YNI-QKESTLHLVLRLRG 379
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 258 YNIXEKKFIVIMVTKPKG 311
YNI +K+ + +V + +G
Sbjct: 439 YNI-QKESTLHLVLRLRG 455
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAG 224
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 503
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 78 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 257
ML+ +KTL + +++I+P + V+ +K K+E ++G QRLI+AGK + DD
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEG--IPPPQQRLIFAGKQMNDDKTAAD 58
Query: 258 YNI 266
Y +
Sbjct: 59 YKV 61
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +3
Query: 75 KMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKIN 254
K+ V++KTL +T I I +TV+ LK K++ + G D QRLI+ L +D +
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVP--PDQQRLIFGRAQLENDRALF 217
Query: 255 SYNIXEKKFI 284
+YNI ++ I
Sbjct: 218 AYNIRDEDII 227
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 81 LVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDN 245
+V +KTL + F +E+ E V ++K KIE +G A+ QRL YAG+ L D +
Sbjct: 1 MVFVKTLHRTLF-LEVAANEDVLSIKQKIEAAEG--IPAEEQRLCYAGRQLEDSD 52
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 81 LVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDN 245
+V +KTL + F +E+ E V ++K KIE +G A+ QRL YAG+ L D +
Sbjct: 1 MVFVKTLHRTLF-LEVAANEDVLSIKQKIEAAEG--IPAEEQRLCYAGRQLEDSD 52
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAST 368
D+ + + I + + +++ P + + PT++S P + + S+
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAST 368
D+ + + I + + +++ P + + PT++S P + + S+
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.5 bits (68), Expect = 0.54
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAS 365
D+ + + I + + +++ P + + PT++S P G S
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPTMGGMGS 106
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAST 368
D+ + + I + + +++ P + + PT++S P + + S+
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAST 368
D+ + + I + + +++ P + + PT++S P + + S+
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.5 bits (68), Expect = 0.54
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAS 365
D+ + + I + + +++ P + + PT++S P G S
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPTMGGMGS 106
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +3
Query: 63 TKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKIL 233
T+S + V +K+ + + +EI + +V LK K+ V K+ V +IY GKIL
Sbjct: 3 TESALIKVHVKSPSNK-YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKIL 57
Query: 234 LDDNKINSYNIXEKKFIVIMVTK-----PKGSESQPTSTSIPEAGESAST 368
D+ + + I + + +++ P + + PT++S P + + S+
Sbjct: 58 KDEETLTQHKIADGHTVHLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 84 VTLKTLQQQTFQIEIDPEETVKALKLKIEV-EKGKDFVADHQRLIYAGKILLDDNKINSY 260
VTLKTL + + I ++T+++L I++ + + + QR+I G++L + +
Sbjct: 23 VTLKTLDDREATVTIGLQDTIQSL---IDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 261 NIXEKKFIVIMVTKPKGSESQP 326
I + + + ++ P G +P
Sbjct: 80 GISDGQTVHLVDRGPSGENDRP 101
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 84 VTLKTLQQQTFQIEIDPEETVKALKLKIEV-EKGKDFVADHQRLIYAGKILLDDNKINSY 260
VTLKTL + + I ++T+++L I++ + + + QR+I G++L + +
Sbjct: 23 VTLKTLDDREATVTIGLQDTIQSL---IDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 261 NIXEKKFIVIMVTKPKGSESQP 326
I + + + ++ P G +P
Sbjct: 80 GISDGQTVHLVDRGPSGENDRP 101
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 258 YNIXEKKFIVIMVTKPKGSESQPTSTS 338
Y I E+ FI T+P SE QPT S
Sbjct: 530 YEIQEENFIAPKATEPSASEPQPTRAS 556
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 501 IMDMGYDRPQVEQALRASFNNTXRAVQYL 587
++ MG+ +++ ALR S N+ +A+QYL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 501 IMDMGYDRPQVEQALRASFNNTXRAVQYL 587
++ MG+ +++ ALR S N+ +A+QYL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 501 IMDMGYDRPQVEQALRASFNNTXRAVQYL 587
++ MG+ +++ ALR S N+ +A+QYL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 501 IMDMGYDRPQVEQALRASFNNTXRAVQYL 587
++ MG+ +++ ALR S N+ +A+QYL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical protein
C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 66 KSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDN 245
KS K L LK Q+ IE+D + K +L +EK ++ + +H+ + + L +N
Sbjct: 1132 KSQKKLQILKERHQEAI-IELDEMQNEKRKQL---LEKERNTMKEHEAKYHEMRELWQEN 1187
Query: 246 KINSYNIXEKKF 281
I + E+KF
Sbjct: 1188 LIARKTVLEEKF 1199
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 120 IEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYNIXEKKFIVIMVT 299
+E+ ++ +++K+ D V L Y G+ L D+ I SYNI + + I +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFN-LYYGGQKLQDNRSIGSYNIDQSREIYLKKK 158
Query: 300 K 302
K
Sbjct: 159 K 159
>Z22181-3|CAA80181.3| 416|Caenorhabditis elegans Hypothetical
protein ZK632.4 protein.
Length = 416
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 292 WLQNLKAPRASLHQLPY 342
W+Q +K P S++QLPY
Sbjct: 326 WVQEVKGPAGSIYQLPY 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,298,693
Number of Sequences: 27780
Number of extensions: 223065
Number of successful extensions: 733
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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