Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_F07
         (379 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    33   0.051
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p...    28   2.5  
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr...    28   2.5  
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ...    28   2.5  
L16621-8|AAA28228.1|  632|Caenorhabditis elegans Hypothetical pr...    26   7.8  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 33.5 bits (73), Expect = 0.051
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +1

Query: 82  KTF*LTARRKDAKSVKIKKN 141
           K F + ARRKDAKSVKIKKN
Sbjct: 9   KDFLVKARRKDAKSVKIKKN 28


>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical protein
            T01H8.5d protein.
          Length = 1931

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1647 LLKLPGTDPILEEKDHDSGENSNSLPPG 1674


>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical protein
            T01H8.5c protein.
          Length = 1971

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1687 LLKLPGTDPILEEKDHDSGENSNSLPPG 1714


>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
            T01H8.5a protein.
          Length = 2032

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1748 LLKLPGTDPILEEKDHDSGENSNSLPPG 1775


>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
            protein T01H8.5d protein.
          Length = 1931

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1647 LLKLPGTDPILEEKDHDSGENSNSLPPG 1674


>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical protein
            T01H8.5c protein.
          Length = 1971

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1687 LLKLPGTDPILEEKDHDSGENSNSLPPG 1714


>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
            T01H8.5a protein.
          Length = 2032

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1748 LLKLPGTDPILEEKDHDSGENSNSLPPG 1775


>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
            homologous cationchannel protein.
          Length = 1971

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 170  MLKVPGTPWVITDKAEG*GNLRQSLPPG 253
            +LK+PGT  ++ +K    G    SLPPG
Sbjct: 1687 LLKLPGTDPILEEKDHDSGENSNSLPPG 1714


>L16621-8|AAA28228.1|  632|Caenorhabditis elegans Hypothetical
           protein ZK688.2 protein.
          Length = 632

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 18  PLTVLVENYSSSTCRAEIKDIKDFLINGEEERRQIGQNKEE 140
           P   LVE ++ +T + E +  +D     EEE R+ G N +E
Sbjct: 546 PAITLVERFNEATGQLETEVKRDEKKKKEEELREEGDNGKE 586


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,805,572
Number of Sequences: 27780
Number of extensions: 95379
Number of successful extensions: 243
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)