Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_F02
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.78 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.78 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +1

Query: 112 RNRSGYHVLLRWCLPAREGGDHRQRPGXTGPLRLMLRSQ 228
           R R G     +WC P R       R    GP RL  RS+
Sbjct: 575 RARYGLDQQNQWCKPCRPREQLTWRRNFHGPHRLAARSR 613


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +1

Query: 112 RNRSGYHVLLRWCLPAREGGDHRQRPGXTGPLRLMLRSQ 228
           R R G     +WC P R       R    GP RL  RS+
Sbjct: 467 RARYGLDQQNQWCKPCRPREQLTWRRNFHGPHRLAARSR 505


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +3

Query: 381 DGGKPKIXVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 506
           D  KPKI    + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 150 TPTQEYVVPRSIPS 109
           TPT + VV R+IPS
Sbjct: 15  TPTDQRVVTRTIPS 28


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 151 LPAREGGDHRQRP 189
           +P R+  DHR RP
Sbjct: 246 IPIRQCDDHRDRP 258


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -1

Query: 294 ILCCWGSS 271
           + CCWG S
Sbjct: 11  VACCWGKS 18


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 406 TLILGLPPSLTTSKGQC 356
           +L+LGL PS   + G+C
Sbjct: 17  SLLLGLYPSYLQTVGKC 33


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 99  FCHFVFLISRCYLF 58
           FC+F++L +  Y++
Sbjct: 147 FCYFIYLFTVYYIY 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,623
Number of Sequences: 336
Number of extensions: 2538
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)