Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_F01
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 316 1e-86
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 316 1e-86
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 283 6e-77
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 227 4e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 198 2e-51
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 198 2e-51
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 175 2e-44
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 120 9e-28
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 6e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 6e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 83 1e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 83 1e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 83 1e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 9e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 48 6e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 3e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 36 0.025
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.076
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.076
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.13
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.23
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.23
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.23
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.1
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 28 6.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 316 bits (775), Expect = 1e-86
Identities = 147/167 (88%), Positives = 157/167 (94%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 508 FXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
F AGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF E
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTE 169
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 316 bits (775), Expect = 1e-86
Identities = 147/167 (88%), Positives = 157/167 (94%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 508 FXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
F AGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF E
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTE 169
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 283 bits (695), Expect = 6e-77
Identities = 131/147 (89%), Positives = 141/147 (95%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 508 FXAGISKNGQTREHALLAFTLGVKQLI 588
F AGISKNGQTREHALLA TLGVKQL+
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 227 bits (556), Expect(2) = 4e-65
Identities = 103/115 (89%), Positives = 112/115 (97%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 492
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 38.7 bits (86), Expect(2) = 4e-65
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 583 LIVGVNKMDSTEPPYSEPRFEE 648
L+V NKMDSTEPP+SE RF E
Sbjct: 114 LVVACNKMDSTEPPFSEARFTE 135
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 198 bits (484), Expect = 2e-51
Identities = 104/214 (48%), Positives = 140/214 (65%), Gaps = 4/214 (1%)
Frame = +1
Query: 19 ESIXATITRSFVTPVAECQKKLFCEREKVKSTIPTNSTNQKWARKRLT----LTLSVIGH 186
ES T++R P +E F R ++++ S +K + R+ + L V+GH
Sbjct: 124 ESTTPTVSR----PSSEVDLTSF-RRNQLQNIAKAPSVARKTPKPRVADKDLINLIVVGH 178
Query: 187 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 366
VD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI
Sbjct: 179 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDI 238
Query: 367 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTRE 546
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF G GQT+E
Sbjct: 239 GRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKE 298
Query: 547 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
HALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 299 HALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 330
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 198 bits (484), Expect = 2e-51
Identities = 104/214 (48%), Positives = 140/214 (65%), Gaps = 4/214 (1%)
Frame = +1
Query: 19 ESIXATITRSFVTPVAECQKKLFCEREKVKSTIPTNSTNQKWARKRLT----LTLSVIGH 186
ES T++R P +E F R ++++ S +K + R+ + L V+GH
Sbjct: 142 ESTTPTVSR----PSSEVDLTSF-RRNQLQNIAKAPSVARKTPKPRVADKDLINLIVVGH 196
Query: 187 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 366
VD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI
Sbjct: 197 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDI 256
Query: 367 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTRE 546
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF G GQT+E
Sbjct: 257 GRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKE 316
Query: 547 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
HALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 317 HALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 348
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 175 bits (426), Expect = 2e-44
Identities = 78/162 (48%), Positives = 112/162 (69%)
Frame = +1
Query: 163 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 342
+ + +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ER
Sbjct: 110 INMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEER 169
Query: 343 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGI 522
E+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEF G
Sbjct: 170 EKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGF 229
Query: 523 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
+ GQTREH++L T GVK L++ VNKMD + E RF+E
Sbjct: 230 DRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKE 271
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 120 bits (289), Expect = 9e-28
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAER 342
LK +
Sbjct: 63 LKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 87.8 bits (208), Expect = 6e-18
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Frame = +1
Query: 145 ARKRLTLTLSVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 318
A ++ + + IGH+D GK+T T + + G K KF++
Sbjct: 40 ATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE--------------- 82
Query: 319 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 498
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 499 TGEFXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 618
G QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 87.8 bits (208), Expect = 6e-18
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Frame = +1
Query: 145 ARKRLTLTLSVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 318
A ++ + + IGH+D GK+T T + + G K KF++
Sbjct: 40 ATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE--------------- 82
Query: 319 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 498
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 499 TGEFXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 618
G QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 83.4 bits (197), Expect = 1e-16
Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
R + L + IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 508 FXAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 639
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 83.4 bits (197), Expect = 1e-16
Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
R + L + IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 508 FXAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 639
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 83.4 bits (197), Expect = 1e-16
Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
R + L + IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 508 FXAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 639
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 58.4 bits (135), Expect = 4e-09
Identities = 46/145 (31%), Positives = 66/145 (45%)
Frame = +1
Query: 175 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 354
++ HVD GKST L+ CG + +K+ +LDKL+ ERERGI
Sbjct: 47 IVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERERGI 88
Query: 355 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNG 534
T+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 89 TVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQA 141
Query: 535 QTREHALLAFTLGVKQLIVGVNKMD 609
QT + LAF + Q+I +NK+D
Sbjct: 142 QTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.0 bits (124), Expect = 9e-08
Identities = 45/147 (30%), Positives = 64/147 (43%)
Frame = +1
Query: 169 LSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 348
+ + H+DSGK+T T ++Y G ID E+ +G +D + ER+R
Sbjct: 47 IGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQR 96
Query: 349 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISK 528
GITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQS 151
Query: 529 NGQTREHALLAFTLGVKQLIVGVNKMD 609
T L + + I VNKMD
Sbjct: 152 QTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.0 bits (124), Expect = 9e-08
Identities = 37/112 (33%), Positives = 52/112 (46%)
Frame = +1
Query: 169 LSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 348
+ VI HVD+GK+T T L+Y G I A + KG+ V D L ERER
Sbjct: 28 IGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERER 74
Query: 349 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 504
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 300
RKR +SVI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 301 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 468
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVT 134
Query: 469 DCAVLIVAAGTG 504
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 47.6 bits (108), Expect = 8e-06
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 300
RKR +SVI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 301 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 468
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVT 134
Query: 469 DCAVLIVAAGTG 504
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.3 bits (95), Expect(2) = 3e-05
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 289 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 465
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 466 ADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 609
AD VL+VAA G QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDG-------VKEQTAQSIKFAKDANV-QLVVAVNKID 267
Score = 22.6 bits (46), Expect(2) = 3e-05
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1
Query: 169 LSVIGHVDSGKST 207
++++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 41.9 bits (94), Expect = 4e-04
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Frame = +1
Query: 163 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 342
L L ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 343 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAG 519
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 520 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 618
I QT EH LLA ++I+ +NK D E
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE 139
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/84 (25%), Positives = 37/84 (44%)
Frame = +1
Query: 397 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLGV 576
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 577 KQLIVGVNKMDSTEPPYSEPRFEE 648
L++ NK+D + + +E+
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQ 205
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 34.7 bits (76), Expect = 0.057
Identities = 48/159 (30%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Frame = +1
Query: 157 LTLTLSVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 330
+ + L+V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 167 IEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDV 223
Query: 331 KAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVA 492
RG ++ A E S VT+ID G + K I G + A L+VA
Sbjct: 224 IGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVA 283
Query: 493 AGTGEFXAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 609
A G A TREH L L + ++ + KMD
Sbjct: 284 ADRGITWA-------TREHLGLIAALNIPMFVL-ITKMD 314
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 34.3 bits (75), Expect = 0.076
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = +1
Query: 175 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 354
++ HVD GK++ L+ I R G +Y +D + E+ RGI
Sbjct: 25 LVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSREDEQTRGI 69
Query: 355 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 489
T+ + + +ID+PGH DF + + +D A+L++
Sbjct: 70 TMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 34.3 bits (75), Expect = 0.076
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = +1
Query: 175 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 354
++ HVD GK++ L+ I R G +Y +D + E+ RGI
Sbjct: 25 LVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSREDEQTRGI 69
Query: 355 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 489
T+ + + +ID+PGH DF + + +D A+L++
Sbjct: 70 TMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 602 LFTPTMSCLTPRVKASKACSRV*PFLEIPAXNSPVPAATMSTA 474
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 322 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 486
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 487 VAAGTG 504
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 322 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 486
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 487 VAAGTG 504
V A G
Sbjct: 107 VDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 406 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQTREHALLAFTLGVKQL 585
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 586 IVGVNKMDSTEPPYSEPR 639
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 244 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 345
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 244 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 345
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 163 LTLSVIGHVDSGKSTTT 213
L L ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 400 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 495
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHL-IYKCGG 240
RK+ L L +IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,874
Number of Sequences: 27780
Number of extensions: 297173
Number of successful extensions: 883
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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