Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_F01
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 332 2e-93
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 325 3e-91
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 231 4e-63
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 198 4e-53
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 28 0.068
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.4
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 5.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 332 bits (815), Expect = 2e-93
Identities = 156/167 (93%), Positives = 162/167 (97%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE
Sbjct: 63 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 122
Query: 508 FXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
F AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEE
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEE 169
Score = 25.0 bits (52), Expect = 0.63
Identities = 12/15 (80%), Positives = 12/15 (80%), Gaps = 2/15 (13%)
Frame = +3
Query: 141 MGKEKTHINIV--GH 179
MGKEK HINIV GH
Sbjct: 1 MGKEKIHINIVVIGH 15
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 325 bits (798), Expect = 3e-91
Identities = 152/167 (91%), Positives = 160/167 (95%)
Frame = +1
Query: 148 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 327
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 328 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 507
LKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGE 122
Query: 508 FXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
F AGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEE
Sbjct: 123 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEE 169
Score = 25.0 bits (52), Expect = 0.63
Identities = 12/15 (80%), Positives = 12/15 (80%), Gaps = 2/15 (13%)
Frame = +3
Query: 141 MGKEKTHINIV--GH 179
MGKEK HINIV GH
Sbjct: 1 MGKEKIHINIVVIGH 15
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 231 bits (565), Expect = 4e-63
Identities = 110/112 (98%), Positives = 110/112 (98%)
Frame = +1
Query: 313 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 492
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 493 AGTGEFXAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
AGTGEF AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEE
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEE 112
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 198 bits (483), Expect = 4e-53
Identities = 94/96 (97%), Positives = 94/96 (97%)
Frame = +1
Query: 361 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFXAGISKNGQT 540
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF AGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 541 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEE 648
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEE
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEE 96
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 400 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 504
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +1
Query: 169 LSVIGHVDSGKST 207
++++GHVD GK+T
Sbjct: 148 VTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 28.3 bits (60), Expect = 0.068
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = +1
Query: 55 TPVAECQKKLFCEREKVKSTIPTNSTNQKWARKRLTLTLSVIGH---VDSGKSTTTGHLI 225
TP+ EC K+ C+ + + N Q+ + + + + G V + K+ G +
Sbjct: 469 TPIYECNKRCNCDIDCI------NRVVQRGTKMQFCIFRTANGRGWGVKTMKTIKKGSFV 522
Query: 226 YKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALW 375
+ G + T E+ EK +E Y + LD ++E + T+D A++
Sbjct: 523 TQYVG-EVITNEEAEKRGKEYDAAGRTYLFDLDYNESEEQCPYTVDAAIY 571
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 151 KRLTLTLSVIGHVDSGKST 207
++ T+ + IGHV GKST
Sbjct: 39 RQATINIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 385 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 486
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 385 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 486
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 5.9
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2
Query: 203 DLPESTCPMTDNVNVSLF 150
++PE CP T+++ +F
Sbjct: 192 EVPEDKCPFTEHLGYLIF 209
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 546 LTGLTVLRDTSXEFTGTGSYDEHSAISLR 460
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,036
Number of Sequences: 438
Number of extensions: 3350
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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