Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_E23
         (412 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118790-1|AAM50650.1|   68|Drosophila melanogaster GH15688p pro...    40   0.001
AE014296-3570|AAF51742.1|   68|Drosophila melanogaster CG7181-PA...    40   0.001
AF181636-1|AAD55422.1|  682|Drosophila melanogaster BcDNA.GH0726...    27   7.3  
AE014296-1743|AAF50206.1|  734|Drosophila melanogaster CG14168-P...    27   7.3  
AE014134-2078|AAS64682.1|  682|Drosophila melanogaster CG31705-P...    27   7.3  
AE014134-2077|AAS64681.1|  682|Drosophila melanogaster CG31705-P...    27   7.3  
AE014134-2076|AAF53106.2|  682|Drosophila melanogaster CG31705-P...    27   7.3  

>AY118790-1|AAM50650.1|   68|Drosophila melanogaster GH15688p
           protein.
          Length = 68

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 118 KNVAQQRNMSVICTPPRNKVSRGEMIFLASLMVVGWSAIPAWVLVNIKHYR 270
           ++  Q R  SV+  PP  ++S  E + L   M      IPAWVL +I+ Y+
Sbjct: 15  RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>AE014296-3570|AAF51742.1|   68|Drosophila melanogaster CG7181-PA
           protein.
          Length = 68

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 118 KNVAQQRNMSVICTPPRNKVSRGEMIFLASLMVVGWSAIPAWVLVNIKHYR 270
           ++  Q R  SV+  PP  ++S  E + L   M      IPAWVL +I+ Y+
Sbjct: 15  RSAMQSRCQSVVSGPPTQRISTAEKVILGGGMCAASLFIPAWVLYHIRDYK 65


>AF181636-1|AAD55422.1|  682|Drosophila melanogaster BcDNA.GH07269
           protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 198 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 293
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>AE014296-1743|AAF50206.1|  734|Drosophila melanogaster CG14168-PA
           protein.
          Length = 734

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = +3

Query: 120 ECR-PTKEHERYLHSAKKQGFQR*DDLPRQPDGGGLVCH----PSLGVGQHQAL-PRQAI 281
           ECR P  E    +HS +K+G     D P Q D GGL       P L      AL  RQ I
Sbjct: 163 ECRQPMSE----VHSEEKRGDVNGHDAPGQADEGGLPVENLYLPDLPDRPCSALSERQEI 218

Query: 282 KLSQKNMXSIL 314
           KL ++ + ++L
Sbjct: 219 KLVEEEIAAVL 229


>AE014134-2078|AAS64682.1|  682|Drosophila melanogaster CG31705-PC,
           isoform C protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 198 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 293
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>AE014134-2077|AAS64681.1|  682|Drosophila melanogaster CG31705-PB,
           isoform B protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 198 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 293
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


>AE014134-2076|AAF53106.2|  682|Drosophila melanogaster CG31705-PA,
           isoform A protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 198 PRQPDGGGLVCHPSLGVGQHQALPRQAIKLSQ 293
           P  P GGG++C P    G     P + I+L Q
Sbjct: 537 PNAPPGGGIICVPVKVPGPDPKDPTKTIELDQ 568


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,680,865
Number of Sequences: 53049
Number of extensions: 290691
Number of successful extensions: 1101
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)