Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_E22
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071003-1|AAL48625.1|  299|Drosophila melanogaster RE09034p pro...    56   4e-08
AY070700-1|AAL48171.1|  299|Drosophila melanogaster RH37735p pro...    56   4e-08
AE014296-2231|AAF49854.1|  299|Drosophila melanogaster CG11268-P...    56   4e-08

>AY071003-1|AAL48625.1|  299|Drosophila melanogaster RE09034p
           protein.
          Length = 299

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +1

Query: 319 NICPAGKQAIIWFMLTVCXXXXXXXXXXXXXXTSXIWALTYWGPSLYFCLLNFIXRYAYK 498
           ++C  G+ ++  F++T                   +W    WGP LY+ L+N I R+  +
Sbjct: 16  SLCSEGRISLYCFLITAALVLIPSVPQNLYGVVPQVWGAVLWGPFLYYALINMIIRFVLR 75

Query: 499 XFLYEVSIRAAFLGAVFTIGLYLSTF 576
              Y+V+IRA+FLG    + + +  F
Sbjct: 76  NHDYQVAIRASFLGFAMAVSVLVICF 101


>AY070700-1|AAL48171.1|  299|Drosophila melanogaster RH37735p
           protein.
          Length = 299

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +1

Query: 319 NICPAGKQAIIWFMLTVCXXXXXXXXXXXXXXTSXIWALTYWGPSLYFCLLNFIXRYAYK 498
           ++C  G+ ++  F++T                   +W    WGP LY+ L+N I R+  +
Sbjct: 16  SLCSEGRISLYCFLITAALVLIPSVPQNLYGVVPQVWGAVLWGPFLYYALINMIIRFVLR 75

Query: 499 XFLYEVSIRAAFLGAVFTIGLYLSTF 576
              Y+V+IRA+FLG    + + +  F
Sbjct: 76  NHDYQVAIRASFLGFAMAVSVLVICF 101


>AE014296-2231|AAF49854.1|  299|Drosophila melanogaster CG11268-PA
           protein.
          Length = 299

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +1

Query: 319 NICPAGKQAIIWFMLTVCXXXXXXXXXXXXXXTSXIWALTYWGPSLYFCLLNFIXRYAYK 498
           ++C  G+ ++  F++T                   +W    WGP LY+ L+N I R+  +
Sbjct: 16  SLCSEGRISLYCFLITAALVLIPSVPQNLYGVVPQVWGAVLWGPFLYYALINMIIRFVLR 75

Query: 499 XFLYEVSIRAAFLGAVFTIGLYLSTF 576
              Y+V+IRA+FLG    + + +  F
Sbjct: 76  NHDYQVAIRASFLGFAMAVSVLVICF 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,148,461
Number of Sequences: 53049
Number of extensions: 438589
Number of successful extensions: 810
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)