Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_E22
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81479-9|CAE17735.1|  215|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U28733-2|AAA68303.3|  381|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 75  FCIVNLIFILIHPLKS*TINCHRICDRNEYL**IVNKYMKIKNVXYIDYIY 227
           F I+ L +IL+ P        ++  D+N ++  I N + ++    +I YIY
Sbjct: 31  FIILFLFYILVFPFYVYVNKVNKERDKNAFVFPITNHFFEMTKNAFIGYIY 81


>Z81479-9|CAE17735.1|  215|Caenorhabditis elegans Hypothetical
           protein C34F6.11 protein.
          Length = 215

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 487 YAYKXFLYEVSIRAAFLGAV--FTIGLYLSTF 576
           + Y  ++  +    AF+G V  FT+GLY STF
Sbjct: 60  FCYSVYINFIFALLAFVGGVLCFTLGLYYSTF 91


>U28733-2|AAA68303.3|  381|Caenorhabditis elegans Hypothetical
           protein C54A12.2 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 242 LCISAIYVINIGYIFYFHILIHNSSQIFI 156
           L I  IY+  +G IF + I+IH +S  FI
Sbjct: 336 LTIQNIYLEMLGEIFNYLIIIHTASTFFI 364


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,918,140
Number of Sequences: 27780
Number of extensions: 248987
Number of successful extensions: 502
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)