Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_E22
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    26   0.26 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   1.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.7  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   9.7  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.7  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +3

Query: 225 YRGNTQISFKQ*S*KLLSTTGILYNGCFNN------EKHMPRRKTSDNMVYANRLYIFHI 386
           Y G   I   Q S K++S  G+L+ G  NN       +H P ++ + +MV  N   +  I
Sbjct: 296 YEGIQDIFNTQSSAKVMSKNGVLFFGLVNNSAIGCWNEHQPLQRQNMDMVAQNEKTLQMI 355

Query: 387 I 389
           I
Sbjct: 356 I 356


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
 Frame = +3

Query: 267 KLLSTTGILYNGCFNN------EKHMPRRKTSDNMVYAN 365
           K++S  G+L+ G  NN       +H P ++ + +MV  N
Sbjct: 310 KIMSKNGVLFFGLMNNSAIGCWNEHQPLQRENMDMVAQN 348


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 156 NEYL**IVNKYMKIKN 203
           NEY+  + NKY KI N
Sbjct: 370 NEYIWIVSNKYQKIAN 385


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 226 IAEIHKSVLNNNLENYSRLQ 285
           I+ +    ++NN  NY +LQ
Sbjct: 82  ISSLSNKTIHNNNNNYKKLQ 101


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 226 IAEIHKSVLNNNLENYSRLQ 285
           I+ +    ++NN  NY +LQ
Sbjct: 82  ISSLSNKTIHNNNNNYKKLQ 101


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 226 IAEIHKSVLNNNLENYSRLQ 285
           I+ +    ++NN  NY +LQ
Sbjct: 82  ISSLSNKTIHNNNNNYKKLQ 101


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 226 IAEIHKSVLNNNLENYSRLQ 285
           I+ +    ++NN  NY +LQ
Sbjct: 82  ISSLSNKTIHNNNNNYKKLQ 101


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
 Frame = +3

Query: 225 YRGNTQISFKQ*S*KLLSTTGILYNG--------CFNNEKHMPRR 335
           Y+G   I + Q S K +S  G+L+ G        C+N  + + RR
Sbjct: 293 YQGKENILWTQASAKGISDNGVLFFGLVGDTSLACWNENRLLDRR 337


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 226 IAEIHKSVLNNNLENYSRLQ 285
           I+ +    ++NN  NY +LQ
Sbjct: 315 ISSLSNKTIHNNNNNYKKLQ 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,532
Number of Sequences: 438
Number of extensions: 3386
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)