Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_E17
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 32 0.41
AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 31 0.94
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92826-5|CAB07318.1| 198|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical pr... 28 6.7
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 28 6.7
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 28 6.7
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 349 LEKEISSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADT 519
L +E S+L + +NT VNTL + +S + +S+ L+ T+ VE+++ DT
Sbjct: 180 LREENSTLKLLYNENTAQVNTLAMISAALSSNEESVNRNLQPTPTH---VENELQDT 233
>AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical
protein Y57A10C.11 protein.
Length = 262
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 91 LLNYYINIFYIKLKLNSSVIYIYIKVNCT--YFIMNESFLNPIPEPKKI 231
+LN+Y + FYI + + +Y Y+ V T +F E F IP+ K+
Sbjct: 103 VLNFYGSWFYILITILIYALYAYLAVGTTERFFAYEEEFRYTIPKSVKL 151
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 364 SSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLL 543
+S VPT + ++T T+V + D+ EG++ V +TY+ ++S + +D L
Sbjct: 13 TSTDVPTNTDQTAMST-TQVVDALE--CDTFEGLMNVNETYVEILDSALLSVQQHLDDNL 69
Query: 544 ---MQLAEEYQEGNSN*CFASLLPFHI 615
QL EEY+ N +P H+
Sbjct: 70 KRQQQLKEEYRLYNRADITKRKVPVHL 96
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 364 SSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLL 543
+S VPT + ++T T+V + D+ EG++ V +TY+ ++S + +D L
Sbjct: 13 TSTDVPTNTDQTAMST-TQVVDALE--CDTFEGLMNVNETYVEILDSALLSVQQHLDDNL 69
Query: 544 ---MQLAEEYQEGNSN*CFASLLPFHI 615
QL EEY+ N +P H+
Sbjct: 70 KRQQQLKEEYRLYNRADITKRKVPVHL 96
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -2
Query: 593 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 435
+K F +PSWY +++S + + D+ F I+ + +L+A+ L
Sbjct: 587 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 639
>Z92826-5|CAB07318.1| 198|Caenorhabditis elegans Hypothetical
protein Y56A3A.1b protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -2
Query: 593 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 435
+K F +PSWY +++S + + D+ F I+ + +L+A+ L
Sbjct: 84 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 136
>Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical
protein T23F11.6 protein.
Length = 187
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 153 VDDATVKLEFYVKYIYVIVK*FSCTSALDSINL 55
V T+ L Y ++I +I ++C +LDS+NL
Sbjct: 3 VSGNTLVLSIYSRFILLITLSYACPPSLDSLNL 35
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = -2
Query: 617 QMWNGNSDAKHQFELPSWYSSANCMSNESTVHTVSAMSDS 498
++W+ N D+ + PS+++ C +EST++ V+ + D+
Sbjct: 443 RLWSHNEDS----QFPSFFAFQKCTVSESTINFVNLLRDN 478
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -2
Query: 593 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 435
+K F +PSWY +++S + + D+ F I+ + +L+A+ L
Sbjct: 587 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,601,459
Number of Sequences: 27780
Number of extensions: 262429
Number of successful extensions: 745
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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