Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_E16
(657 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 113 9e-26
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 113 9e-26
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 113 2e-25
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 112 2e-25
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 36 0.021
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 31 1.1
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 30 1.4
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 4.3
08_01_0077 + 546473-546512,546739-547013,547772-547885,548002-55... 28 7.5
03_02_0221 + 6533643-6533687,6533860-6533955,6535323-6535682,653... 28 7.5
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 113 bits (273), Expect = 9e-26
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +2
Query: 92 VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 271
++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM+VC+LGD QH
Sbjct: 31 ISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQH 90
Query: 272 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 427
+EA+ + + M SE++IKQIPR +G
Sbjct: 91 VEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLG 142
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 408 RFPVLLGPGLNKAGKFPGLLSHQEXMTHXIDEVKGTIKFQMXXVLCLSVAVGHVDMTPDE 587
+ P LLGPG KFP L++HQE + ++E K T+KFQ+ VLC+ VAVG++ M +
Sbjct: 136 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ 190
Query: 588 LAQNVHLSINFL 623
+ QN+ +S+NFL
Sbjct: 191 IQQNIQMSVNFL 202
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 113 bits (273), Expect = 9e-26
Identities = 53/112 (47%), Positives = 72/112 (64%)
Frame = +2
Query: 92 VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 271
++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPKM+VC+LGD QH
Sbjct: 13 ISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQH 72
Query: 272 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 427
+EA+ + + M SE++IKQIPR +G
Sbjct: 73 VEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLG 124
Score = 71.3 bits (167), Expect = 6e-13
Identities = 30/63 (47%), Positives = 45/63 (71%)
Frame = +3
Query: 435 LNKAGKFPGLLSHQEXMTHXIDEVKGTIKFQMXXVLCLSVAVGHVDMTPDELAQNVHLSI 614
++K GKFP L++HQE + ++E K T+KFQ+ VLC+ VAVG+ M ++ QNV +S+
Sbjct: 149 VSKRGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSV 208
Query: 615 NFL 623
NFL
Sbjct: 209 NFL 211
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 113 bits (271), Expect = 2e-25
Identities = 55/112 (49%), Positives = 70/112 (62%)
Frame = +2
Query: 92 VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 271
++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM+VC+LGD QH
Sbjct: 13 ISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQH 72
Query: 272 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 427
+EA+ + + M SE++IKQIPR +G
Sbjct: 73 VEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLG 124
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +3
Query: 408 RFPVLLGPGLNKAGKFPGLLSHQEXMTHXIDEVKGTIKFQMXXVLCLSVAVGHVDMTPDE 587
+ P LLGPG KFP L++HQE + ++E K T+KFQ+ VLC+ VAVG++ M +
Sbjct: 118 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ 172
Query: 588 LAQNVHLSINFL 623
+ QN+ +S+NFL
Sbjct: 173 IQQNIQMSVNFL 184
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 112 bits (270), Expect = 2e-25
Identities = 52/112 (46%), Positives = 72/112 (64%)
Frame = +2
Query: 92 VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 271
++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK++VC+LGD QH
Sbjct: 13 ISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKLKVCMLGDAQH 72
Query: 272 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 427
+EA+ + + M SE++IKQIPR +G
Sbjct: 73 VEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLG 124
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/72 (47%), Positives = 48/72 (66%)
Frame = +3
Query: 408 RFPVLLGPGLNKAGKFPGLLSHQEXMTHXIDEVKGTIKFQMXXVLCLSVAVGHVDMTPDE 587
+ P LLGPG KFP L++HQE + ++E K T+KFQ+ VLC+ VAVG+ M +
Sbjct: 118 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQ 172
Query: 588 LAQNVHLSINFL 623
+ QNV +S+NFL
Sbjct: 173 IFQNVQMSVNFL 184
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 74 TRSTSCVNAVLQ--SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQ 244
T + S V A L S+ +KKRNF ETVE + L DP++ D+ G + L + ++
Sbjct: 265 TPAVSSVTARLPTTSANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVR 323
Query: 245 VCVLGDQQHCDEAK 286
V V + DEA+
Sbjct: 324 VAVFAEGPAADEAR 337
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 92 VNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM-QVCVLGDQ 265
+ + LQS K K R +E + D + K + +K + PK +VCV D
Sbjct: 261 LKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDP 320
Query: 266 QHCDEAKTLNVPCM 307
+CD+ VP +
Sbjct: 321 NNCDDFDPTTVPTL 334
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +1
Query: 34 GSLTNKMSSKVSRDTLYELRECRSSIL*GQET*LFGDCRASNWSEEL*PTEGQAFLRHCK 213
GS + M S+ +R E+ + R+ L G ++ FG+ R SN+ G+A +
Sbjct: 535 GSRWHSMDSQSARHLSKEIADARNLHL-GVKSVSFGEGRVSNFGHSSHLGNGEATVPEDA 593
Query: 214 AKIHTAAENASLRSWRPAA 270
KIH AE +L++ RP +
Sbjct: 594 KKIHKFAE--ALKTSRPGS 610
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 209 QCRRNACPSVGHSSSDQFEALQSPKS 132
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>08_01_0077 +
546473-546512,546739-547013,547772-547885,548002-550245
Length = 890
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 569 HMANCYRKTQHXXHLELNGSLDFINXVRHXLLVGEKTREFT 447
H+ N Y K +H H LN L LL K REF+
Sbjct: 837 HILNIYAKARHFSHNVLNMLLGLTGTGSSQLLSQPKAREFS 877
>03_02_0221 +
6533643-6533687,6533860-6533955,6535323-6535682,
6537106-6537177,6537374-6537697
Length = 298
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 242 AFSAAVCILALQCRRNACPSVGH 174
A A VCI L+CR+ CP H
Sbjct: 110 ASRAEVCIFCLRCRQVLCPRCSH 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,255,706
Number of Sequences: 37544
Number of extensions: 328963
Number of successful extensions: 713
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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