Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_E15
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...    64   7e-11
07_03_0571 - 19602755-19603831                                         62   4e-10
08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899     32   0.46 
03_06_0737 + 35879723-35879990,35880105-35880201,35880464-358805...    29   2.4  
05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274...    29   4.2  
03_05_0287 + 22759946-22760836                                         27   9.8  

>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
 Frame = +3

Query: 132 KAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDD 311
           +A+  R+KSV+NIQKIT++MKMV+A+K    +   + +R   +    F       P  D 
Sbjct: 60  RALRTRMKSVRNIQKITKAMKMVAASKLRAVQIRTENSRGLWQ---PFTALLGDVPSVDV 116

Query: 312 PKQLFVAMTSDRGLCGAVHT---GVSKVIRNRLSEPGAENIXVICVGXKSRGILXRLYGK 482
            K + VA+TSD+GLCG +++    VSK +    S P  E+  VI +G K +  L R    
Sbjct: 117 KKNVIVAITSDKGLCGGINSTSVKVSKALHKLTSGPEKESKYVI-LGEKGKVQLIRDSKD 175

Query: 483 HIIXVANEIGRLP 521
           +I    +E+ + P
Sbjct: 176 NIEMTVSELQKNP 188


>07_03_0571 - 19602755-19603831
          Length = 358

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
 Frame = +3

Query: 126 TLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTPP 302
           +L+ +  R+ SV+N QKIT++MK+V+AAK  RA+  + ++RP+ E  V+  Y   +    
Sbjct: 37  SLRELRSRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQT 96

Query: 303 ED----------DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSE---PGAENIXVICVG 443
           ED            K   V +T +RGLCG+ +  V K    R+ E    G E   V+ VG
Sbjct: 97  EDIDLPLTRIRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIEELKQLGLE-YTVVSVG 155

Query: 444 XKSRGILXRLYGKHIIXVAN--EIGRLPPTFLDASQLATAILTSGYEFGSGKI--IYNKF 611
            K      R   +  I      E+  + PT  D+  +   + +        K+  +Y+KF
Sbjct: 156 KKGNAYFIR---RPFIPTERTLEVNGI-PTVKDSQSICDLVYSLFVSEAVDKVELLYSKF 211

Query: 612 KSVV 623
            S+V
Sbjct: 212 VSLV 215


>08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899
          Length = 712

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 529 SWTQVSWPLPFSPQDTSLVPERSFITSSSLWYRTPSPTCP 648
           SW++  W +P S Q  S+ P+ S I ++ LW R PS   P
Sbjct: 306 SWSRAFWAIPASTQSISM-PQESTIPNNLLW-RKPSKDNP 343


>03_06_0737 +
           35879723-35879990,35880105-35880201,35880464-35880591,
           35880686-35880767,35880855-35880918,35880930-35881022,
           35881120-35881178,35881391-35881826,35882050-35882120,
           35882201-35882351
          Length = 482

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
 Frame = -1

Query: 454 RDLXPTQITLMFS---------APGSLRRLRITLDTPVCTAPHKPLSEVIAT---NNCLG 311
           RD+ P +I  +F          + GSL+R R++        PH   S  I     + C+G
Sbjct: 313 RDIVPPEIKAIFGRQYVIRTSVSRGSLQRNRVSYQVDSLMLPHPDPSHAICLPSHDTCMG 372

Query: 310 SSSGGVTSA 284
           SS  G TSA
Sbjct: 373 SSGHGSTSA 381


>05_06_0223 -
           26525618-26526112,26526203-26526370,26526649-26527473,
           26527898-26528004,26529701-26529767
          Length = 553

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = -3

Query: 422 VLSTRFAETVADHFRYTSVYSSAQTSVR---GHSNKQLLGV-IFGRCNLSPFIELYCTFT 255
           VL T          ++ SV     T++R   GH +++L  V I G C+ +  +EL C   
Sbjct: 382 VLDTFILSVQQGGMKHDSVSGDTTTNLRTMPGHKHERLKEVMIIGFCSATSMVELTCHIL 441

Query: 254 IGTSSFQVTLSTGVFSS*HHLHGL 183
             T+S + T++       H L  +
Sbjct: 442 ENTTSLE-TITLDAVCDVHDLENI 464


>03_05_0287 + 22759946-22760836
          Length = 296

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 219 RAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGL 353
           R+  DLK   P+  G  +  ERA +   ++DP  +FV    D G+
Sbjct: 223 RSVIDLKPVLPWPIGKPKGKERACLAVVDEDPDVIFVGTEEDDGV 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,213,523
Number of Sequences: 37544
Number of extensions: 453887
Number of successful extensions: 1208
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)