Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_E15
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 195 3e-50
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 195 3e-50
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 162 2e-40
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.2
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 29 2.9
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 28 6.6
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 28 6.6
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 6.6
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 27 8.7
U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 195 bits (475), Expect = 3e-50
Identities = 100/183 (54%), Positives = 126/183 (68%), Gaps = 4/183 (2%)
Frame = +3
Query: 114 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 284
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 285 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIXVICVGXKSRGI 461
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I V+ +G KSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 462 LXRLYGKHIIXVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 641
L RLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 642 LPL 650
L +
Sbjct: 203 LQI 205
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 195 bits (475), Expect = 3e-50
Identities = 100/183 (54%), Positives = 126/183 (68%), Gaps = 4/183 (2%)
Frame = +3
Query: 114 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 284
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 285 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIXVICVGXKSRGI 461
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I V+ +G KSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 462 LXRLYGKHIIXVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 641
L RLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 642 LPL 650
L +
Sbjct: 203 LQI 205
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 162 bits (393), Expect = 2e-40
Identities = 85/154 (55%), Positives = 104/154 (67%), Gaps = 4/154 (2%)
Frame = +3
Query: 114 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 284
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 285 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIXVICVGXKSRGI 461
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I V+ +G KSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 462 LXRLYGKHIIXVANEIGRLPPTFLDASQLATAIL 563
L RLY I+ NEIGR PP+F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 234 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 392
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +1
Query: 487 SLXLLMRLDVSHLLSWTQVSWPLPFSPQDTSLVPERSFITS 609
SL LL R+D +H L W S P PF SL P S I S
Sbjct: 560 SLDLLSRIDGAHELLWFPPSLP-PFVKLFASLTPGGSLIYS 599
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -3
Query: 563 ENGSGQLTC--VQESRWETSNLISN 495
E GSG + C VQ S WE +N+IS+
Sbjct: 233 EIGSGNIICSGVQNSVWEAANIISH 257
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 519 PPTFLDASQLATAILTSGYEFGSGKI 596
PPTF D + A + GY FG KI
Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKI 28
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 309 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 422
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 309 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 422
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical
protein F41D3.3 protein.
Length = 348
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/62 (20%), Positives = 32/62 (51%)
Frame = -3
Query: 548 QLTCVQESRWETSNLISNXNDVLSVQSXQDTARFXSHTDHXDVLSTRFAETVADHFRYTS 369
Q+ V++ R++ + I + N+++++Q + H D+L A+ + HF++
Sbjct: 146 QVESVEKQRFKNALQIQSVNELVTLQRTSTDSCL--HCPGVDILDRESAQALRKHFQFAD 203
Query: 368 VY 363
V+
Sbjct: 204 VW 205
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -1
Query: 451 DLXPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 278
D T M + G LR + TPV +PL +N LGSS G ++S S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601
>U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical
protein F47C10.1 protein.
Length = 376
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 120 YSCLADGKPPPRLGCPHPVRSVPTFCKFYGCLS-GKIYQST 1
Y+CLADG G H R C+F CL G Y+ST
Sbjct: 51 YTCLADGSCYTNFGFTHG-RPKCRSCRFRKCLDVGMKYRST 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,886
Number of Sequences: 27780
Number of extensions: 362130
Number of successful extensions: 938
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -