BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_E09
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 34 0.043
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 33 0.075
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 30 0.70
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 30 0.70
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF100656-6|AAF99961.1| 240|Caenorhabditis elegans Hypothetical ... 29 1.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.1
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 29 2.1
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 3.7
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 27 4.9
Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 4.9
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 4.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 4.9
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 27 4.9
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 27 4.9
Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 8.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 8.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 8.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 27 8.6
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 27 8.6
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 8.6
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 27 8.6
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 27 8.6
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 34.3 bits (75), Expect = 0.043
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLP 325
T+T T TT T P TTT T T + T T T K T+S P
Sbjct: 263 TQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTP 312
Score = 33.5 bits (73), Expect = 0.075
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 316
TET T TT T+ TTT ET T +TT T T P T+
Sbjct: 114 TETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 316
TET T TT + P TTT T T +TT T T P T+
Sbjct: 137 TETTTTPTTTTTETTTTPTTTTT--TPTTTTTTPTTTTTTPTTTTTT 181
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 33.5 bits (73), Expect = 0.075
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVH--ITWTLPKADLTSS 319
TET T TT +P TTT T T +TT T T P A T+S
Sbjct: 141 TETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTS 190
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 31.5 bits (68), Expect = 0.30
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 298
TET T +T T+ + P TTT T T ++TT T P
Sbjct: 203 TETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTTSTSPAP 243
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.1 bits (67), Expect = 0.40
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 298
T T T TT+ T+ P TTT T STT T T P
Sbjct: 62 TTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 298
T T+T TT T TTT T T +T T T+P
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 30.7 bits (66), Expect = 0.53
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTLPKADLTSSLP 325
T T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 302 TTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPKADLTSS 319
T T T TT TS P TTT T T STT T T+ T++
Sbjct: 295 TTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPKADLTSS 319
T T T TT T+ P TTT T T STT T T T++
Sbjct: 277 TTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTA 325
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 30.3 bits (65), Expect = 0.70
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS-SLPLSLV 337
T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 92 TTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 170 RVTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 319
R T T + T ART+ P TTT + + T L TT+ + + D +S+
Sbjct: 382 RTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDGSST 431
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TWTLPKADLTSSLPLS 331
T T T+ + T T++++ TTT +TTV + T T+P + T++ PL+
Sbjct: 196 TTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLN 250
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 182 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 331
T T TT T+ P TT N +TT T+P + T+++PL+
Sbjct: 187 TTTTTTTTTTTTTTSPMNTTTTTVLINGTTTT----TVPTNETTTTVPLN 232
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 179 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 322
ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 303 ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 179 ETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 322
ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 303 ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>AF100656-6|AAF99961.1| 240|Caenorhabditis elegans Hypothetical
protein F49F1.7 protein.
Length = 240
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLP 325
TET TT TT T STTV T T PK T S P
Sbjct: 159 TETTETTETTKAIKTTKTTETTKATKTTTPSTTVKTTTTKPKPPCTDSSP 208
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 173 VTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 331
VT T T TS P TTT M+T T +T+ T + S+ +S
Sbjct: 290 VTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTIS 342
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +1
Query: 139 GHVNVVDNNHPGHGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPQ 300
G + V+++ + N Y+P++ +VNP K + NG+ + + + A Y VDPP+
Sbjct: 813 GVLKYVEDHVDDNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPK 871
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 331
T T T +T T+L TTT T T + +I T+P T S L+
Sbjct: 214 TTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALT 265
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 331
T T T +T T+L TTT T T + +I T+P T S L+
Sbjct: 214 TTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALT 265
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT-LPKADLTSSLP 325
TET TT T + P TT T T TT T T P+ T+ P
Sbjct: 281 TETTIEAQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTEAP 331
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 190 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 276
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical
protein T27E7.1 protein.
Length = 226
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +1
Query: 166 HPGHGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PFP 333
+P G + P N + N P + GY P PP+G Y++P P+
Sbjct: 35 NPQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPYK 92
Query: 334 GARGGK 351
+GGK
Sbjct: 93 PGKGGK 98
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.5 bits (58), Expect = 4.9
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Frame = +2
Query: 170 RVTETATNLLTT---ARTSLILPKTTTLME---TATNLS-TTVHI-TWT 292
R T +T L TT T+ +P TTT+ E T+T S TT I TWT
Sbjct: 119 RTTSASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWT 167
>Z68748-6|CAD27621.1| 88|Caenorhabditis elegans Hypothetical
protein F13H10.6 protein.
Length = 88
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 187 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 327
Y+P + P P P GY P G YY QG PY+ P
Sbjct: 3 YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 182 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 322
T+T TT+ T + TTT T T L+TT T LPK L L
Sbjct: 124 TSTTTTTTSTTPVPTTTTTTEAATTTVLTTT---TEELPKQQLAGRL 167
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 200 TTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVGSKE 358
TT + PKTTT++ ++T ST +T +A T++ P + V +K+
Sbjct: 444 TTTSLATEQPKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTTTKK 493
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 170 RVTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 331
R T +T+ T+ P TTT + + T STT T T PK ++S S
Sbjct: 578 RKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTT-TTTTTPKPTTSTSTSTS 630
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 170 RVTETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 331
R T +T+ T+ P TTT + + T STT T T PK ++S S
Sbjct: 578 RKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTT-TTTTTPKPTTSTSTSTS 630
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 182 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 319
T T + TT RTS +P TTT + + T P D T +
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKT 339
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.5 bits (58), Expect = 4.9
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Frame = +2
Query: 170 RVTETATNLLTT---ARTSLILPKTTTLME---TATNLS-TTVHI-TWT 292
R T +T L TT T+ +P TTT+ E T+T S TT I TWT
Sbjct: 119 RTTSASTTLSTTQPQTTTTTTIPSTTTMTESSSTSTTASPTTTRIRTWT 167
>Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical
protein K02B12.2 protein.
Length = 196
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 218 LILPKTTTLMETATNLSTTVHITWTLPKAD 307
+I+ TT +++ T+LS + TW LPK D
Sbjct: 18 VIVNHYTTHVKSTTDLSKCGNCTWVLPKLD 47
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 250 NGYEPIDNGAYYVDPPQGRPYFKPTPFPGA 339
NGY +NG +P Q P P+ FPGA
Sbjct: 1146 NGYPNNNNGGAIGNPQQMLPPRDPSAFPGA 1175
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 4185 NAAGHGEPSNGSEPVTCRPYVEKP 4208
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 4714 NAAGHGEPSNGSEPVTCRPYVEKP 4737
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 4395 NAAGHGEPSNGSEPVTCRPYVEKP 4418
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 4185 NAAGHGEPSNGSEPVTCRPYVEKP 4208
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 4714 NAAGHGEPSNGSEPVTCRPYVEKP 4737
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 4395 NAAGHGEPSNGSEPVTCRPYVEKP 4418
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 325
T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 504 TTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 325
T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 345 TTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 325
T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 385 TTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 163 NHPGHG---NGYEPIDNRPYIVNP 225
N GHG NG EP+ RPY+ P
Sbjct: 3604 NAAGHGEPSNGSEPVTCRPYVEKP 3627
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 176 TETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTLPKADL 310
T +T+ TT+ T+ TTT ET T ++TT+ T + P+A +
Sbjct: 329 TTPSTSTTTTSSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEATI 375
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 157 DNNHPGHGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRP 309
+N + G+G+ P P+ PP P G Y P GA+Y PP G P
Sbjct: 278 NNGNNGNGHPQYPYPVPPHGYYPPGYPYPPGYPYPP--PGAFYY-PPGGIP 325
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 26.6 bits (56), Expect = 8.6
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +1
Query: 178 GNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 345
G G P P V PP Y P +G DNGA P G PY P P G
Sbjct: 357 GGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYPSDVPAPYPSG 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,855,568
Number of Sequences: 27780
Number of extensions: 215744
Number of successful extensions: 708
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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