Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_E02
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p pro...   166   2e-41
AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA...   166   2e-41
U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase pitch...    28   9.6  

>AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p
           protein.
          Length = 157

 Score =  166 bits (404), Expect = 2e-41
 Identities = 87/147 (59%), Positives = 106/147 (72%)
 Frame = +1

Query: 109 ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVL 288
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FGIL KHVPTLAVL
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVL 69

Query: 289 RPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEXAHPLESIDRSAAQEALSKAQSE 468
           +PGVV ++ENDGK  K FVSSG++TVN+DSSVQVLAE AH +E ID + A++ L+K QS+
Sbjct: 70  KPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQ 129

Query: 469 FXXXXXXXXXXXXXIALQVXEXIVKAA 549
                         IA++V E +VKAA
Sbjct: 130 LSSAGDDKAKAQAAIAVEVAEALVKAA 156


>AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA
           protein.
          Length = 157

 Score =  166 bits (404), Expect = 2e-41
 Identities = 87/147 (59%), Positives = 106/147 (72%)
 Frame = +1

Query: 109 ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVL 288
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FGIL KHVPTLAVL
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVL 69

Query: 289 RPGVVTILENDGKQNKIFVSSGTITVNDDSSVQVLAEXAHPLESIDRSAAQEALSKAQSE 468
           +PGVV ++ENDGK  K FVSSG++TVN+DSSVQVLAE AH +E ID + A++ L+K QS+
Sbjct: 70  KPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQ 129

Query: 469 FXXXXXXXXXXXXXIALQVXEXIVKAA 549
                         IA++V E +VKAA
Sbjct: 130 LSSAGDDKAKAQAAIAVEVAEALVKAA 156


>U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase
           pitchoune protein.
          Length = 663

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +1

Query: 70  EWHWHSVAVIRNVARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQV--VKQIDVPSFSG 243
           E+ W  +A I+    +L  +NY       E   ++         KQ+  V  +D+ + + 
Sbjct: 543 EFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAK 602

Query: 244 AFGILPKHVPTLAVLRP 294
           +FG L   V  L V RP
Sbjct: 603 SFGFLVPPVVDLKVARP 619


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,035,039
Number of Sequences: 53049
Number of extensions: 438815
Number of successful extensions: 715
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)