Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D17
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2...    83   6e-16
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.     83   6e-16
AF485466-1|AAL96553.1|  104|Homo sapiens immunoglobulin light ch...    31   2.7  
AF485464-1|AAL96551.1|  104|Homo sapiens immunoglobulin light ch...    31   2.7  
AF485458-1|AAL96545.1|  104|Homo sapiens immunoglobulin light ch...    31   2.7  
AF485474-1|AAL96561.1|  104|Homo sapiens immunoglobulin light ch...    31   3.6  

>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
            alpha-2-macroglobulin domain containing 8 protein.
          Length = 1885

 Score = 83.4 bits (197), Expect = 6e-16
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = +3

Query: 168  VRAANDAHIALTTGPQESDPMYEVMIGGWGNAXSVIRKNXTKPDKVEIESPGILNGGEYR 347
            VRA NDA +AL++GPQ++  M E+++GG  N  S I  +          +  IL+  E+R
Sbjct: 977  VRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWISTSKMGEPVASAHTAKILSWDEFR 1036

Query: 348  GFWVRWDSGIISAGREGE---AIPFISWSDPEPFPVYYVGVCTGWGATGSXKIEDGAEFD 518
             FW+ W  G+I  G   E       ++W+ P P  V ++G  TGWG+ G  +I    E D
Sbjct: 1037 TFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQFIGFSTGWGSMGEFRIWRKMEVD 1096


>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
          Length = 1884

 Score = 83.4 bits (197), Expect = 6e-16
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
 Frame = +3

Query: 168  VRAANDAHIALTTGPQESDPMYEVMIGGWGNAXSVIRKNXTKPDKVEIESPGILNGGEYR 347
            VRA NDA +AL++GPQ++  M E+++GG  N  S I  +          +  IL+  E+R
Sbjct: 976  VRAHNDARVALSSGPQDTAGMIEIVLGGHQNTRSWISTSKMGEPVASAHTAKILSWDEFR 1035

Query: 348  GFWVRWDSGIISAGREGE---AIPFISWSDPEPFPVYYVGVCTGWGATGSXKIEDGAEFD 518
             FW+ W  G+I  G   E       ++W+ P P  V ++G  TGWG+ G  +I    E D
Sbjct: 1036 TFWISWRGGLIQVGHGPEPSNESVIVAWTLPRPPEVQFIGFSTGWGSMGEFRIWRKMEVD 1095


>AF485466-1|AAL96553.1|  104|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 104

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 414 ISWSDPEPFPVYYVGVCTGWGATGSXKIE 500
           IS  DPE F VYY    + WG  G  K+E
Sbjct: 73  ISSLDPEDFAVYYCQQRSNWGFGGGTKVE 101


>AF485464-1|AAL96551.1|  104|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 104

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 414 ISWSDPEPFPVYYVGVCTGWGATGSXKIE 500
           IS  +PE F VYY    T WG  G  K+E
Sbjct: 73  ISSLEPEDFAVYYCQQRTNWGFGGGTKVE 101


>AF485458-1|AAL96545.1|  104|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 104

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 414 ISWSDPEPFPVYYVGVCTGWGATGSXKIE 500
           IS  +PE F VYY    T WG  G  K+E
Sbjct: 73  ISSLEPEDFAVYYCQQRTNWGFGGGTKVE 101


>AF485474-1|AAL96561.1|  104|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 104

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 414 ISWSDPEPFPVYYVGVCTGWGATGSXKIE 500
           IS  +PE F VYY    T WG  G  K+E
Sbjct: 73  ISSLEPEDFAVYYCQQRTDWGFGGGTKVE 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,044,274
Number of Sequences: 237096
Number of extensions: 2112350
Number of successful extensions: 5583
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5581
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)