Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_D16
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 32 0.41
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 32 0.41
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 32 0.41
U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 29 3.8
AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate cyc... 29 3.8
AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical ... 29 3.8
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 27 8.8
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 84 NEIEDFNNPARL*LRHFSTMSVEASDSGKSDRK---LYNSVISADYDDATKRCEQLQSEP 254
N+++D + +R + F + V+ SG+S+++ ++ VI + K C ++
Sbjct: 162 NQLDDIIDYSRCSISSFMPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHIS- 220
Query: 255 NGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKD 416
NG T +L N S INF K I FP++ I +K D
Sbjct: 221 NGIASPNTTFNSILFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKVD 274
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 84 NEIEDFNNPARL*LRHFSTMSVEASDSGKSDRK---LYNSVISADYDDATKRCEQLQSEP 254
N+++D + +R + F + V+ SG+S+++ ++ VI + K C ++
Sbjct: 162 NQLDDIIDYSRCSISSFMPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHIS- 220
Query: 255 NGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKD 416
NG T +L N S INF K I FP++ I +K D
Sbjct: 221 NGIASPNTTFNSILFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKVD 274
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 84 NEIEDFNNPARL*LRHFSTMSVEASDSGKSDRK---LYNSVISADYDDATKRCEQLQSEP 254
N+++D + +R + F + V+ SG+S+++ ++ VI + K C ++
Sbjct: 162 NQLDDIIDYSRCSISSFMPVYVDIITSGQSEKEWLNVFQEVIPNLVETPDKACIKIHIS- 220
Query: 255 NGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDDKKD 416
NG T +L N S INF K I FP++ I +K D
Sbjct: 221 NGIASPNTTFNSILFNVGSPIINFQSKSIHVQASKIRSFDFPVDVNHIAVEKVD 274
>U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical
protein W03B1.8 protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 189 NSVIS-ADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNA 305
N+VI DY+ A KR +QL + NG ++ + + E NN+
Sbjct: 607 NTVIKLGDYEMARKRYDQLVKDCNGKCVLVDYLPEFYNNS 646
>Z67884-2|CAA91808.1| 429|Caenorhabditis elegans Hypothetical
protein T14G8.4 protein.
Length = 429
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 373 QL*TIFWCPVVHSL*EKLIVLDSALLSSSVTVFFMMYEPFGSD*SCSHLLVASS 212
QL + WCP + ++ L++AL S TVF Y + D + +L VAS+
Sbjct: 237 QLNIVMWCPFIVGT---VVNLNAALRQSLYTVFVENYLDYEEDQTAHNLNVAST 287
>Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = +3
Query: 177 RKLYNSVISADYDDATKRCEQLQS----EPNGSYIIKNTVTELLNNAESNTI----NFSY 332
++++ +S T+R Q+ + E + +++K T+ N T + +Y
Sbjct: 156 KRVFKLDVSMTITGRTQRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNY 215
Query: 333 KLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLXQNG 482
K+ T H + + S FP + +++D +DCKI+ +LY + KDL G
Sbjct: 216 KIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDLLSVG 259
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 202 EMTELYSFRSDLPESLASTDIVEKCRNYNRAGLLKSS 92
++T + ++ D+P+ L + +KCRN N+ L +S
Sbjct: 334 DLTRIENWEEDIPKDLPGYEDAKKCRNDNQRSCLITS 370
>AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 675
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = +3
Query: 177 RKLYNSVISADYDDATKRCEQLQS----EPNGSYIIKNTVTELLNNAESNTI----NFSY 332
++++ +S T+R Q+ + E + +++K T+ N T + +Y
Sbjct: 156 KRVFKLDVSMTITGRTQRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNY 215
Query: 333 KLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLXQNG 482
K+ T H + + S FP + +++D +DCKI+ +LY + KDL G
Sbjct: 216 KIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDLLSVG 259
>AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Frame = +3
Query: 177 RKLYNSVISADYDDATKRCEQLQS----EPNGSYIIKNTVTELLNNAESNTI----NFSY 332
++++ +S T+R Q+ + E + +++K T+ N T + +Y
Sbjct: 156 KRVFKLDVSMTITGRTQRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNY 215
Query: 333 KLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDLXQNG 482
K+ T H + + S FP + +++D +DCKI+ +LY + KDL G
Sbjct: 216 KIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDLLSVG 259
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = -1
Query: 335 FVREINCVRFGIVKQLRN-CVLYDVRTIRFG----LKLLASFGCIIVVSGND*IV*FSVG 171
F +IN +R VK LRN C+L + + L + SF C ++ S ++ + SV
Sbjct: 137 FEDQINRLRAKEVKMLRNVCILSRIVDVANAASPFLVAIGSFTCYVLWSPDENGLTPSVA 196
Query: 170 FARITCFNR 144
F +T FN+
Sbjct: 197 FVALTIFNQ 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,828,832
Number of Sequences: 27780
Number of extensions: 276217
Number of successful extensions: 706
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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