Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D14
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   6.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.7  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 165 QNTGTCPESSCACPETSC 218
           +NTG C      C + SC
Sbjct: 99  KNTGRCAFDGICCSQDSC 116


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 180 CPESSCACPETSC 218
           CP+ S AC + +C
Sbjct: 117 CPDGSLACGDGNC 129


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 48   PPGSKPAEKKPGNSQNT 98
            P  +K  EKKPG+  +T
Sbjct: 1147 PKSAKCEEKKPGHKPST 1163


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 75  NGAPPRSTPPLSTPSNSNAT 94


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +3

Query: 39  NXGPPGSKPAEKKPGNSQNT 98
           N  PP S P    P NS  T
Sbjct: 119 NGAPPRSTPPLSTPSNSNAT 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,929
Number of Sequences: 336
Number of extensions: 617
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)