Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D10
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical ...    35   0.044
Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U55370-1|AAA97993.3|  313|Caenorhabditis elegans Serpentine rece...    28   5.0  
AL132876-5|CAC48119.1|  576|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.8 protein.
          Length = 814

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 556 VSVRAHWLSVDGVQPTVPENPPP 624
           + ++ HWL VDG+QP +PEN  P
Sbjct: 207 IMIKDHWLVVDGIQPCLPENVIP 229


>Z70212-8|CAB54284.1|  320|Caenorhabditis elegans Hypothetical
           protein R04D3.12 protein.
          Length = 320

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 88  YHCILWVNRLIFYS*FFPVVI 26
           Y+CI+  N L+F   FFPV++
Sbjct: 262 YYCIITKNELLFVEFFFPVIV 282


>U55370-1|AAA97993.3|  313|Caenorhabditis elegans Serpentine
           receptor, class x protein77 protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +2

Query: 404 KTMSVNMDLFSLIRCHLGSHLEEVENSISLKKXXXISRRFYQHHLQRFHWMYLFVLIG*V 583
           K +  NM LF  I       L  +  + ++K    I  RFY    Q F W  + V+ G +
Sbjct: 218 KDIKKNMALFFQIIFQ--DSLFFISVAFTMKMNMLIDHRFYSFFSQTFLWQSIHVIDGII 275

Query: 584 WMGFNQ 601
            + FN+
Sbjct: 276 MLLFNE 281


>AL132876-5|CAC48119.1|  576|Caenorhabditis elegans Hypothetical
           protein Y105E8A.5 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -3

Query: 110 YDYDRPLVSLYSL--G*SFNFLFLIFSCCDKVKLINVD 3
           YD+D PL+ ++ L  G S++F  L++ C D  K  N D
Sbjct: 511 YDFDTPLIPVHLLASGQSYSFTTLLY-CKDPEKAANCD 547


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +1

Query: 532 PPPKVPLDV--SVRAHWLSVDGVQPTVPENPPP 624
           PPP +PLD+     A   SV G  P  P  PPP
Sbjct: 553 PPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,830,329
Number of Sequences: 27780
Number of extensions: 264228
Number of successful extensions: 745
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)