Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D08
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 544 PVYEVYGSGLSKSYLGYXFNFXFSXYYIYECIK 446
           PVY  + SG    Y  Y F      Y  Y+ +K
Sbjct: 264 PVYNQWWSGPLSMYYQYPFGLPEYEYSFYQEVK 296


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 32  RLNIVFFXFCTTV*YSMKKDYYRIK 106
           R  ++FF  C +V  +  +D Y IK
Sbjct: 2   RFFVIFFVACVSVALARPEDQYTIK 26


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 13  KKKRLNQVKHCFFXVLYYSLIF 78
           +K  L   K+C F +L+Y  +F
Sbjct: 312 RKTVLKTNKYCNFIILFYLSVF 333


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 499 LNKTCSIPNHKPHKLVVIISSFRNAR 576
           LN   +I N KP K  V +S  RNA+
Sbjct: 453 LNPLDAICN-KPRKDAVCVSQLRNAK 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,414
Number of Sequences: 336
Number of extensions: 2269
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)