Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_D08
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060817-1|AAL28365.1| 721|Drosophila melanogaster GH28787p pro... 55 1e-07
AF153209-1|AAD47349.1| 721|Drosophila melanogaster origin recog... 55 1e-07
AF152093-1|AAD32712.2| 721|Drosophila melanogaster LATHEO protein. 55 1e-07
AF139062-1|AAD39472.1| 721|Drosophila melanogaster origin recog... 55 1e-07
AE013599-1658|AAM68599.1| 721|Drosophila melanogaster CG4088-PB... 55 1e-07
AE013599-1657|AAF58411.1| 721|Drosophila melanogaster CG4088-PA... 55 1e-07
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 28 9.6
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 28 9.6
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 28 9.6
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 28 9.6
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 28 9.6
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 28 9.6
>AY060817-1|AAL28365.1| 721|Drosophila melanogaster GH28787p
protein.
Length = 721
Score = 54.8 bits (126), Expect = 1e-07
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +2
Query: 233 EECWYLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSEXXFMLEGIIPSATLL 412
++ +Y Y K W I + +L RSY+ L + +++ G + ++P+A LL
Sbjct: 46 QQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFV---VGQAERDTPDEVLPTAALL 102
Query: 413 TGVSQPDHVSQFDAL 457
TG++QPDH+SQF AL
Sbjct: 103 TGINQPDHLSQFTAL 117
>AF153209-1|AAD47349.1| 721|Drosophila melanogaster origin
recognition complex subunit protein.
Length = 721
Score = 54.8 bits (126), Expect = 1e-07
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +2
Query: 233 EECWYLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSEXXFMLEGIIPSATLL 412
++ +Y Y K W I + +L RSY+ L + +++ G + ++P+A LL
Sbjct: 46 QQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFV---VGQAERDTPDEVLPTAALL 102
Query: 413 TGVSQPDHVSQFDAL 457
TG++QPDH+SQF AL
Sbjct: 103 TGINQPDHLSQFTAL 117
>AF152093-1|AAD32712.2| 721|Drosophila melanogaster LATHEO protein.
Length = 721
Score = 54.8 bits (126), Expect = 1e-07
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +2
Query: 233 EECWYLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSEXXFMLEGIIPSATLL 412
++ +Y Y K W I + +L RSY+ L + +++ G + ++P+A LL
Sbjct: 46 QQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFV---VGQAERDTPDEVLPTAALL 102
Query: 413 TGVSQPDHVSQFDAL 457
TG++QPDH+SQF AL
Sbjct: 103 TGINQPDHLSQFTAL 117
>AF139062-1|AAD39472.1| 721|Drosophila melanogaster origin
recognition complex subunit3 protein.
Length = 721
Score = 54.8 bits (126), Expect = 1e-07
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +2
Query: 233 EECWYLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSEXXFMLEGIIPSATLL 412
++ +Y Y K W I + +L RSY+ L + +++ G + ++P+A LL
Sbjct: 46 QQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFV---VGQAERDTPDEVLPTAALL 102
Query: 413 TGVSQPDHVSQFDAL 457
TG++QPDH+SQF AL
Sbjct: 103 TGINQPDHLSQFTAL 117
>AE013599-1658|AAM68599.1| 721|Drosophila melanogaster CG4088-PB,
isoform B protein.
Length = 721
Score = 54.8 bits (126), Expect = 1e-07
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +2
Query: 233 EECWYLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSEXXFMLEGIIPSATLL 412
++ +Y Y K W I + +L RSY+ L + +++ G + ++P+A LL
Sbjct: 46 QQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFV---VGQAERDTPDEVLPTAALL 102
Query: 413 TGVSQPDHVSQFDAL 457
TG++QPDH+SQF AL
Sbjct: 103 TGINQPDHLSQFTAL 117
>AE013599-1657|AAF58411.1| 721|Drosophila melanogaster CG4088-PA,
isoform A protein.
Length = 721
Score = 54.8 bits (126), Expect = 1e-07
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +2
Query: 233 EECWYLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSEXXFMLEGIIPSATLL 412
++ +Y Y K W I + +L RSY+ L + +++ G + ++P+A LL
Sbjct: 46 QQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFV---VGQAERDTPDEVLPTAALL 102
Query: 413 TGVSQPDHVSQFDAL 457
TG++QPDH+SQF AL
Sbjct: 103 TGINQPDHLSQFTAL 117
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 166 HLEIKTLPLKLTQWIPLNSVLNSIIIFLHRILNCST 59
H I ++ +W+PL SVLNS ++ +H + ST
Sbjct: 243 HKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDST 278
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 166 HLEIKTLPLKLTQWIPLNSVLNSIIIFLHRILNCST 59
H I ++ +W+PL SVLNS ++ +H + ST
Sbjct: 185 HKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDST 220
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 166 HLEIKTLPLKLTQWIPLNSVLNSIIIFLHRILNCST 59
H I ++ +W+PL SVLNS ++ +H + ST
Sbjct: 185 HKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDST 220
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 166 HLEIKTLPLKLTQWIPLNSVLNSIIIFLHRILNCST 59
H I ++ +W+PL SVLNS ++ +H + ST
Sbjct: 243 HKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDST 278
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 166 HLEIKTLPLKLTQWIPLNSVLNSIIIFLHRILNCST 59
H I ++ +W+PL SVLNS ++ +H + ST
Sbjct: 243 HKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDST 278
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 166 HLEIKTLPLKLTQWIPLNSVLNSIIIFLHRILNCST 59
H I ++ +W+PL SVLNS ++ +H + ST
Sbjct: 243 HKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFSDST 278
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,984,549
Number of Sequences: 53049
Number of extensions: 352738
Number of successful extensions: 578
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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