Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D08
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68302-7|CAH60770.1|  495|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z68302-6|CAA92635.2|  510|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL033510-5|CAA22068.1|  239|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z68302-7|CAH60770.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK792.4b protein.
          Length = 495

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 117 NGIHCVSFKGSVFISKWISKLENSFKEKNKFIVL*IISTK 236
           N IHC ++ GSV +   +S L N+F +K +  V+ +  T+
Sbjct: 263 NAIHCAAYSGSVPV---LSHLLNAFSKKKRHYVMTLRDTR 299


>Z68302-6|CAA92635.2|  510|Caenorhabditis elegans Hypothetical
           protein ZK792.4a protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 117 NGIHCVSFKGSVFISKWISKLENSFKEKNKFIVL*IISTK 236
           N IHC ++ GSV +   +S L N+F +K +  V+ +  T+
Sbjct: 278 NAIHCAAYSGSVPV---LSHLLNAFSKKKRHYVMTLRDTR 314


>AL033510-5|CAA22068.1|  239|Caenorhabditis elegans Hypothetical
           protein Y40H7A.9 protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
 Frame = +2

Query: 83  KKDYYRIKNGIQW------NPLCQFQRECFYFQMDFKTRKLFQRKKQIYCFVNYFNEECW 244
           +K Y R+K G+ W       PL     E  Y    F T K  +R   +     ++ E C 
Sbjct: 43  EKGYMRVKRGVNWCGINTEKPLLPIFTELHY----FSTSKHLRRWFALIFIAGFYWETCI 98

Query: 245 YLTYXKNWEAIKTKLNELNQRSYSVLLNDIXNYIKQFYGSE 367
           +     N   I   + +  Q+SY   L+++  Y+   Y  E
Sbjct: 99  FFMAADN-SYIDGIIEQTLQKSYGFNLSNV-TYVAAVYEIE 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,928,561
Number of Sequences: 27780
Number of extensions: 203635
Number of successful extensions: 401
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)