Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D05
         (432 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0576 + 30097139-30097235,30097532-30097630,30097855-300979...    28   3.7  
04_03_1029 - 21835441-21835856,21836666-21836852                       27   4.9  
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980...    27   4.9  
01_06_0784 + 31979670-31979976,31980092-31980337,31980428-319805...    27   4.9  
08_02_0715 - 20352613-20352852,20352926-20352982,20354208-203543...    27   6.5  
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462...    27   6.5  
04_04_0579 - 26355431-26355684,26355988-26356073,26356292-263563...    27   8.6  
02_05_0577 - 30100084-30100251,30100474-30100548,30100631-301007...    27   8.6  

>02_05_0576 +
           30097139-30097235,30097532-30097630,30097855-30097929,
           30098242-30098328,30098553-30098627,30098940-30099026,
           30099204-30099220
          Length = 178

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 250 LQNSQNVKLPCKM*ASGLKSXGKKLPNT 333
           LQN +N+K   KM  SGL S  + L NT
Sbjct: 104 LQNLENIKRRTKMAQSGLVSESESLKNT 131


>04_03_1029 - 21835441-21835856,21836666-21836852
          Length = 200

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +1

Query: 4   EFPISIRLH*EN*KGYLKLLTCFQLFSSFTYALTMSDAPGSPHEVPLHVLSEGRSVPI*I 183
           E  I ++LH      Y++  T   L       +T  +    P    +H L  G  VP+ +
Sbjct: 13  EIEIQVQLHISGALDYMRPNTNGSLVGMVK--MTTGNPRCPPQNQNIHSLRSGHRVPVDV 70

Query: 184 LPPEFVALA 210
           LPP+   LA
Sbjct: 71  LPPDGKLLA 79


>04_03_0301 +
           14094370-14094584,14096694-14096727,14098084-14098095,
           14098400-14098574,14099064-14099299,14099396-14100457
          Length = 577

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 284 LQGSLTFCEFCRRVVRKLRWRQPSNARATN 195
           L G L FC F RR+++     +PS+   TN
Sbjct: 90  LGGVLNFCNFMRRILKSFVMVKPSSLVQTN 119


>01_06_0784 +
           31979670-31979976,31980092-31980337,31980428-31980544,
           31980638-31980792,31980910-31980984,31981080-31981346,
           31981436-31981756,31981858-31982271
          Length = 633

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 262 VNFVEEW*GNYDGGSPVTPEPQILE 188
           ++F+++W G+ D  SP  PEP   E
Sbjct: 576 LDFMDDWNGDADRPSPTAPEPAAQE 600


>08_02_0715 -
           20352613-20352852,20352926-20352982,20354208-20354339,
           20354754-20354828,20355779-20355943,20356031-20356263,
           20356484-20356574,20356789-20357223,20357911-20357976,
           20358688-20358807,20358915-20359121
          Length = 606

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 220 CRHRNFLTTLLQNSQNVKLPCKM*ASGLKSXGKKLPNTTKCS 345
           C  RN     LQN     +  K  ASG+   G K+     CS
Sbjct: 422 CAQRNIPLIFLQNITGFMVGSKSEASGIAKAGAKMVMAVSCS 463


>08_02_0530 +
           18244933-18245217,18245309-18245383,18246176-18246292,
           18246503-18246631,18246726-18246785,18247271-18247441,
           18247596-18247689,18247860-18247951,18248071-18248220,
           18248407-18248465,18249735-18249864
          Length = 453

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 61  LTCFQLFSSFTYALTMSDAPGSPHEVPLHVLSEGRSV 171
           L C+ LF ++    T S+APG     PL   S  RS+
Sbjct: 227 LPCYDLFRNWIEDFTQSNAPGLTPYAPLVAGSVARSL 263


>04_04_0579 -
           26355431-26355684,26355988-26356073,26356292-26356377,
           26356596-26356788,26356895-26357094,26359257-26359379
          Length = 313

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 77  SFLHLLTPSRCRTPLARPMKFPYTFSAKVAQFPYKFYLQNLWLWRYWAAAIVISSPL 247
           SFLH +TP+     +A+P  +    S +V +    F+L +LW   Y  +A  + +P+
Sbjct: 25  SFLHSVTPTLEPYTVAKPGGY----SGRVPELGRCFFLVDLWNHFYPLSAYGVGTPV 77


>02_05_0577 -
           30100084-30100251,30100474-30100548,30100631-30100755,
           30101538-30101609,30102016-30102108,30102333-30102419,
           30103049-30103135,30103448-30103522,30104142-30104238
          Length = 292

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 250 LQNSQNVKLPCKM*ASGLKSXGK 318
           LQN +N+K   KM  SG+KS G+
Sbjct: 71  LQNLENIKRRTKMAQSGIKSDGQ 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,322,796
Number of Sequences: 37544
Number of extensions: 234511
Number of successful extensions: 649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)