Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D05
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    27   0.068
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    27   0.090
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    27   0.090
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   1.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   3.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   4.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.9  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   7.8  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   7.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 27.5 bits (58), Expect = 0.068
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 266 FCEFCRRVVRKLRWRQPSNARATNSGGKIYMGTERPSLRTCKGTS 132
           FC+  +R + K++WR+P  A         Y+  E  +LRT  G S
Sbjct: 24  FCQPTQRTMSKIQWRKPKPAMVEEKTQLRYL-EELNALRTELGAS 67


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 27.1 bits (57), Expect = 0.090
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 82   SSFTYALTMSDAPGSPHEVPLHVLSEGRSVPI*ILPP 192
            ++ TY  T  D PGSP ++ + V+S  +++ I  LPP
Sbjct: 1202 TTVTYCQTEEDVPGSPADIKV-VVSSPQALFISWLPP 1237


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 27.1 bits (57), Expect = 0.090
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 82   SSFTYALTMSDAPGSPHEVPLHVLSEGRSVPI*ILPP 192
            ++ TY  T  D PGSP ++ + V+S  +++ I  LPP
Sbjct: 1198 TTVTYCQTEEDVPGSPADIKV-VVSSPQALFISWLPP 1233


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 226 HRNFLTTLLQNSQNVKLPCKM*ASGLKSXGKKLPNTTKCSS 348
           HR  L   ++ S+N    CK  A    S G +  +  + SS
Sbjct: 189 HRTVLAVNIEKSENETKTCKKYAISSNSLGSRSRSFQRTSS 229


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 69  FSTLFFIYLRP 101
           + TLFFIY++P
Sbjct: 130 YGTLFFIYVQP 140


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 69  FSTLFFIYLRP 101
           + TLFFIY+ P
Sbjct: 131 YGTLFFIYVHP 141


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  LKLLTCFQLFSSFTYALTMSDAP 120
           +KLL    L S  T+  T+ DAP
Sbjct: 1   MKLLFLVLLSSLVTFGWTLEDAP 23


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  LKLLTCFQLFSSFTYALTMSDAP 120
           +KLL    L S  T+  T+ DAP
Sbjct: 1   MKLLFLVLLSSLVTFGWTLEDAP 23


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 64  TCFQLFSSFTY 96
           TCF  F S+TY
Sbjct: 158 TCFMKFGSWTY 168


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 64  TCFQLFSSFTY 96
           TCF  F S+TY
Sbjct: 158 TCFMKFGSWTY 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,024
Number of Sequences: 438
Number of extensions: 2485
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)