Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_D03
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.36 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.36 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    26   0.36 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   0.84 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.9  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.6  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    21   7.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   7.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 458 ETVRTLHDTNIIHGDLTTSNILLIPKN 538
           E +R LH   ++H D+   N+LL  +N
Sbjct: 708 EGIRYLHSQGLVHRDVKLKNVLLDIEN 734


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 458 ETVRTLHDTNIIHGDLTTSNILLIPKN 538
           E +R LH   ++H D+   N+LL  +N
Sbjct: 746 EGIRYLHSQGLVHRDVKLKNVLLDIEN 772


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 446 KMIGETVRTLHDTNIIHGDLTTSNILLIPK 535
           + I E+V   H   ++H DL   N+LL  K
Sbjct: 16  QQILESVHHCHHNGVVHRDLKPENLLLASK 45


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 473 LHDTNIIHGDLTTSNILLIPKNDNDNWIQCCEF 571
           LH  NII+ DL   N+LL    D+  +++  +F
Sbjct: 482 LHSRNIIYRDLKPENLLL----DSQGYVKLVDF 510


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -2

Query: 591 KSIMTK*NSQH*IQLSLSFFGINNILEVVKSPCIMLVSCNVRTVSPIILASMFRL 427
           +S+  + NS   I ++    G NN+     + C++ +  + RT++  I A   RL
Sbjct: 455 RSVSRESNSNQFILMTTVNEGNNNMAATYMNECLLNIQKSPRTLTLGIFAEKLRL 509


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 440 LAKMIGETVRTLHDTNIIHGDLTTSNILL 526
           + K I   ++  H+  I+H D+   NIL+
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILM 188


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 173 RPTLIKERFVKNYRH 217
           RPT++K+R  K  RH
Sbjct: 8   RPTIVKKRTKKFIRH 22


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 488 IIHGDLTTSNILLIPKNDNDNWIQCCEFHLVMIDFGFI 601
           I+ GD+  S   L+   D   +   C+ ++V    GFI
Sbjct: 482 IVKGDVAGSVEALLDIFDTYTYDTICQLNIVHYGIGFI 519



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 572 EIHSIESNYHC 540
           E+ SIE+NY C
Sbjct: 645 EVSSIETNYEC 655


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 21/77 (27%), Positives = 32/77 (41%)
 Frame = +2

Query: 221 DLXTNITKERIKNEARSIVRCKTAGIRTPALYLVDFERRRIYMEHFERNVTVKDFIINLT 400
           ++ T I + +   +A S  R    G  TPA      E RRIY     ++V  +    + T
Sbjct: 634 NISTTIYENQNCLDASSSRRGSKIGSPTPAESTFIPEERRIYSPITFQDVARRSVANSPT 693

Query: 401 KTGSENETNSLNILAKM 451
           K     E  S ++ A M
Sbjct: 694 KNADSREYRSNSMGAVM 710


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,912
Number of Sequences: 438
Number of extensions: 3489
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)