Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_C23
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 34 0.070
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 33 0.093
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 33 0.093
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 31 0.65
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.65
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.65
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.65
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF038615-3|AAB94144.1| 328|Caenorhabditis elegans Hypothetical ... 29 1.5
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 29 2.0
EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 2.0
EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 2.0
AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 2.0
AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 2.0
AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 2.0
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 2.0
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 29 2.0
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 3.5
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 28 3.5
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 28 4.6
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 28 4.6
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 28 4.6
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical pr... 27 8.0
>U42436-9|AAF99893.1| 109|Caenorhabditis elegans Hypothetical
protein C49H3.3 protein.
Length = 109
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +3
Query: 69 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 248
MAKS+RS++KR+ RAI R + K A L+K + +DE + D
Sbjct: 1 MAKSLRSKFKRRVRAIARTKKEPKTAALLQKAIDKRDE----------------YEKQDA 44
Query: 249 KKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWL 410
+K+K + ++++E + V S+ NTKTLK ++G +P WL
Sbjct: 45 EKTK------------TDGTANEEKMEVTSQA----TINTKTLKKKDGSFPAWL 82
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 33.9 bits (74), Expect = 0.070
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +3
Query: 201 EVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGKKR 356
+V + ++++ +D G K K+ + D + + E EM+ ++N D+E KK+
Sbjct: 588 DVNKKKRILSIDFGGKKSLKRKMEDEQMEKEMAEMNDQNDNTEEDAEKKKKK 639
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 33.5 bits (73), Expect = 0.093
Identities = 23/99 (23%), Positives = 48/99 (48%)
Frame = +3
Query: 108 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKD 287
R ++ E L RL+K +++E+ E E +++ L++++K+ +IEK+
Sbjct: 1187 RRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRL-----EQLREAEKLKAEIEKE 1241
Query: 288 NEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 404
NE ++ + ++ E + + TLKD G P+
Sbjct: 1242 NER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 33.5 bits (73), Expect = 0.093
Identities = 23/99 (23%), Positives = 48/99 (48%)
Frame = +3
Query: 108 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKD 287
R ++ E L RL+K +++E+ E E +++ L++++K+ +IEK+
Sbjct: 1187 RRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRL-----EQLREAEKLKAEIEKE 1241
Query: 288 NEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 404
NE ++ + ++ E + + TLKD G P+
Sbjct: 1242 NER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 33.5 bits (73), Expect = 0.093
Identities = 23/99 (23%), Positives = 48/99 (48%)
Frame = +3
Query: 108 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKD 287
R ++ E L RL+K +++E+ E E +++ L++++K+ +IEK+
Sbjct: 1187 RRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRL-----EQLREAEKLKAEIEKE 1241
Query: 288 NEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 404
NE ++ + ++ E + + TLKD G P+
Sbjct: 1242 NER-KLQEERTRKALELERKIEEIKRVSTLKDMFGPLPI 1279
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 102 KCRAIKRER-YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 263
K + KRE Y K R + G+ +EEK G + E E+ ++A D KKS K
Sbjct: 576 KPKLSKREMTYEEKRKERKNRQQGITEEEKDDGEVIEEEEKPKEVEAEDKKKSSK 630
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -2
Query: 422 LTFVQPNRVLSVLIFQGFRIKNSFLAAFTIDHNVFII 312
LT++ P V+ + IF FR + + +A T++H++++I
Sbjct: 29 LTYMTPTIVVMLKIFMSFRGPSHWNSAHTMNHHIYVI 65
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 30.7 bits (66), Expect = 0.65
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +3
Query: 96 KRKCRAIKRERYAVKELARLKK-MLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLX 272
K+ A KRER E A LKK K+E + +E + E+ D + K+ KK
Sbjct: 41 KKDKEARKRERKLQDEFAELKKDEEKDKEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDK 100
Query: 273 DIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 389
+++E E S DD+ +S+ KK T+ + +N
Sbjct: 101 KENENDEKKEKSKDDKK--EESKEDKKEKTKTEDNEGKN 137
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 0.65
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +3
Query: 132 AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSS 311
A K+LA K +K EE+ A +E+ LDA K+ + +EKD + + S
Sbjct: 9449 ATKKLAAEK----LKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQTGLEKDEKSNKDSG 9504
Query: 312 DDENVVVDSEGGKKRVFNTKTLKDQN 389
+E V E KK+V KT K +
Sbjct: 9505 SNETV---EEKPKKKVLKKKTEKSDS 9527
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 171 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGK 350
+K EE+ A E+ LDA +K+ + +EKD++ + S E V E K
Sbjct: 9708 LKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPK 9764
Query: 351 KRVFNTKTLKDQN 389
K+V KT K +
Sbjct: 9765 KKVLKKKTEKSDS 9777
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 0.65
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +3
Query: 132 AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSS 311
A K+LA K +K EE+ A +E+ LDA K+ + +EKD + + S
Sbjct: 9469 ATKKLAAEK----LKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQTGLEKDEKSNKDSG 9524
Query: 312 DDENVVVDSEGGKKRVFNTKTLKDQN 389
+E V E KK+V KT K +
Sbjct: 9525 SNETV---EEKPKKKVLKKKTEKSDS 9547
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 171 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGK 350
+K EE+ A E+ LDA +K+ + +EKD++ + S E V E K
Sbjct: 9728 LKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPK 9784
Query: 351 KRVFNTKTLKDQN 389
K+V KT K +
Sbjct: 9785 KKVLKKKTEKSDS 9797
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 171 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGK 350
+K EE+ A E+ LDA K+ + +EKD + + S E V E K
Sbjct: 13361 LKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQTKLEKDEKSTKESESKETV---DEKPK 13417
Query: 351 KRVFNTKTLKDQN 389
K+V KT K +
Sbjct: 13418 KKVLKKKTEKSDS 13430
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 0.65
Identities = 27/86 (31%), Positives = 40/86 (46%)
Frame = +3
Query: 132 AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSS 311
A K+LA K +K EE+ A +E+ LDA K+ + +EKD + + S
Sbjct: 9469 ATKKLAAEK----LKLEEQSAAKSKQAAEEQAKLDAQTKAKAAEKQTGLEKDEKSNKDSG 9524
Query: 312 DDENVVVDSEGGKKRVFNTKTLKDQN 389
+E V E KK+V KT K +
Sbjct: 9525 SNETV---EEKPKKKVLKKKTEKSDS 9547
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 171 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGK 350
+K EE+ A E+ LDA +K+ + +EKD++ + S E V E K
Sbjct: 9728 LKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQTGLEKDDKSTKDSESKETV---DEKPK 9784
Query: 351 KRVFNTKTLKDQN 389
K+V KT K +
Sbjct: 9785 KKVLKKKTEKSDS 9797
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 171 VKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGK 350
+K EE+ A E+ LDA K+ + +EKD + + S E V E K
Sbjct: 13361 LKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQTKLEKDEKSTKESESKETV---DEKPK 13417
Query: 351 KRVFNTKTLKDQN 389
K+V KT K +
Sbjct: 13418 KKVLKKKTEKSDS 13430
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +3
Query: 204 VMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKD 383
+ + +I LD +LK +++++ ++ + D+ ++ V S + R++NTKTL
Sbjct: 294 ISAEQNLIILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDC 353
Query: 384 Q 386
Q
Sbjct: 354 Q 354
>AF038615-3|AAB94144.1| 328|Caenorhabditis elegans Hypothetical
protein R02D3.5 protein.
Length = 328
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +3
Query: 189 PAGSEVMESEQVIFLDAG-DLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEG----GKK 353
PA V + +V + G DLKK + L DI +++ +V++ G +
Sbjct: 74 PANYTVWQYRRVCLTELGWDLKKEMRYLSDIIQESPKNYQVWHHRRFIVETIGESAVNDE 133
Query: 354 RVFNTKTLKDQNGQYPVWLH 413
F ++ ++D+N Y W H
Sbjct: 134 LHFCSEVIRDENKNYHAWQH 153
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 90 RWKRKCRAIKRERYAV---KELARLKKMLGVKDEEKP-AGSEVM-ESEQVIFLDAGDLKK 254
R KRK K+++ A K+ A KK +DE+K AG E ++E DAGD KK
Sbjct: 398 RTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKK 457
Query: 255 SKKVLXDIEKDNEXVEMSSDDE 320
K +KD E + +++E
Sbjct: 458 KKDAGEKKKKDAEEKKKVAEEE 479
Score = 27.5 bits (58), Expect = 6.1
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 63 NAMAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAG 242
+A K + S W + + IK E+ K++ +KK +K E+K + M + ++
Sbjct: 341 DASRKPMLSHWDLEMKNIKAEK---KKIGAVKKK--IKAEKKEDKKKPMGWMSTLKMERD 395
Query: 243 DLK-KSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKD 383
+ + K K+ +KD E + +E D+E KK+ + KD
Sbjct: 396 ERRTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKD 443
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 180 EEKPAGSEVMESE-QVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGKKR 356
+++P EV+E E + + GD K KKV ++NE ++ E ++ D+E K+R
Sbjct: 558 KKQPEDEEVVEEEDEPLKPPPGD--KKKKVPVKENEENEPPVVAPKAELLLSDNEDKKQR 615
Query: 357 VFNTKTLK 380
+ K LK
Sbjct: 616 IKEEKQLK 623
>EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c
protein.
Length = 765
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLXDIEKDNEXVEMSSDDENVVVDSE 341
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 117 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 174
>EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b
protein.
Length = 818
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLXDIEKDNEXVEMSSDDENVVVDSE 341
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 119 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 176
>AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical
protein Y55D9A.1c protein.
Length = 765
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLXDIEKDNEXVEMSSDDENVVVDSE 341
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 117 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 174
>AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical
protein Y55D9A.1b protein.
Length = 818
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLXDIEKDNEXVEMSSDDENVVVDSE 341
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 119 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 176
>AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical
protein Y55D9A.1a protein.
Length = 816
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKK---VLXDIEKDNEXVEMSSDDENVVVDSE 341
+E P ++++ + +++ D+++S++ ++ EK+N+ +DDE +VVD E
Sbjct: 117 EESSPTAIRMLKTAPIERMESTDVEESEEETVMMTTDEKENQKKPNENDDEVMVVDEE 174
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXD--IEKDNEXVEMSSDDENVVVDSE 341
D+E+ E ES+ DA +KKS V D E+D E +EM +DE D E
Sbjct: 262 DDEEDDDEEEEESDD----DAPQVKKSVAVEEDEEDEEDEEEIEMDEEDEEEEEDEE 314
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 180 EEKPAGSEVMESE-QVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEGGKKR 356
+++P EV+E E + + GD K KKV ++NE ++ E ++ D+E K+R
Sbjct: 558 KKQPEDEEVVEEEDEPLKPPPGD--KKKKVPVKENEENEPPVVAPKAELLLSDNEDKKQR 615
Query: 357 VFNTKTLK 380
+ K LK
Sbjct: 616 IKEEKQLK 623
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +3
Query: 90 RWKRKCRAIKRERYAVKELARLKKMLGVKDEEK--PAGSEVMESEQVIFLDAGDLKKSKK 263
R + KC+ + E K + K+M +K+EE+ A E ++ E+ + K +K
Sbjct: 882 RREEKCKEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEK 941
Query: 264 VLXDIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 386
E++ VE + E V + E K K K++
Sbjct: 942 EKVKAEEEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEK 982
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 243 DLKKSKKVLXDIEKDNEXVEMSSDDENVVVDS 338
+LK S+++L + +N S DDE+VVV+S
Sbjct: 144 ELKSSRRILMNQSIENCHSSSSEDDEDVVVES 175
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +3
Query: 138 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEMSSDD 317
KE + +KM +E AGS+ E E V+F KK KK + NE S DD
Sbjct: 128 KEQEQRRKMYEEDNEHLKAGSDEEEEEDVVF----KKKKGKKPV------NEEEYKSEDD 177
Query: 318 ENVVVDSEG 344
E+ ++ G
Sbjct: 178 EDYEPENSG 186
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 90 RWKRKCRAIKRERYAVKELARLKKMLGVKDE-EKPAGSEVMESEQVIFL----DAGDLKK 254
R K+K + +KR ++ + R+ K + K + +K G +V++ ++++ A KK
Sbjct: 639 RIKKKTKRVKRGKFVRPLMPRIPKFVAKKKKLKKVDGKKVLKRKEIVLTLKVRKASTAKK 698
Query: 255 SKKVLXD 275
+KK + +
Sbjct: 699 TKKAMQE 705
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 27.9 bits (59), Expect = 4.6
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +3
Query: 111 AIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDN 290
A+KR AV ELA L + ++E + S V S ++ LDA K + ++K
Sbjct: 270 ALKRVPDAVAELASLVALNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCE 329
Query: 291 EXVEMSSDDENVVVDSEGG-KKRVFNTKTLKDQNGQYPVW 407
+ + + N + GG N +TL + Q V+
Sbjct: 330 KRIAHLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVF 369
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 27.9 bits (59), Expect = 4.6
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +3
Query: 111 AIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDN 290
A+KR AV ELA L + ++E + S V S ++ LDA K + ++K
Sbjct: 270 ALKRVPDAVAELASLVALNVSRNEIEAGNSSVFSSPELEMLDASYNKLDSLPVEWLQKCE 329
Query: 291 EXVEMSSDDENVVVDSEGG-KKRVFNTKTLKDQNGQYPVW 407
+ + + N + GG N +TL + Q V+
Sbjct: 330 KRIAHLHLEHNSIEQLTGGVLANATNLQTLDLSSNQLRVF 369
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 246 LKKSKKVLXDIEKDNEXVEMSSDDENVVVDSEG 344
+++SKK + E++ E V SDDE++ +S G
Sbjct: 864 IRQSKKSVKKEEEEEEDVSDESDDEDIEDESAG 896
>U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical
protein C01F1.1 protein.
Length = 481
Score = 27.1 bits (57), Expect = 8.0
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 156 KKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLXDIEKDNEXVEM-SSDDENVVV 332
K+++GV +EE S+ ESE + KK K D +K N+ E SS ++ V
Sbjct: 299 KQLVGVAEEEGARESDSSESEDDL------TKKLMKPYGDKKKGNDIEERDSSGTDSDVS 352
Query: 333 DSEGGKKRVFNTKTLKDQNG 392
D+E VF K KD G
Sbjct: 353 DTEKLDSVVF-MKANKDGEG 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,630,574
Number of Sequences: 27780
Number of extensions: 175956
Number of successful extensions: 686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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