Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_C20
(391 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces pom... 31 0.048
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 27 1.0
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 26 1.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 1.8
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 25 3.1
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 25 4.1
SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces pombe... 25 5.5
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 25 5.5
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 24 7.2
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 24 9.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 24 9.5
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 24 9.5
SPBC651.07 |csa1||sequence orphan|Schizosaccharomyces pombe|chr ... 24 9.5
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 24 9.5
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 24 9.5
>SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 31.5 bits (68), Expect = 0.048
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +2
Query: 125 STMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNAESN 304
++++V A DS S + D+D K + + EP G + N L NA+ +
Sbjct: 278 NSVNVYAKDSNHSSASGNTKNKAKDWDSLAKLADLEEDEPTGEAALANLFQNLYKNADDD 337
Query: 305 TINFSYKLWT 334
T K +T
Sbjct: 338 TRRAMMKSYT 347
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 27.1 bits (57), Expect = 1.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 121 MSQL*PSRVVKIFNFI*NSAYVLSSLYPRRPQH 23
+ QL P + I NFI S+++ ++P QH
Sbjct: 566 LKQLWPYIIAMILNFIVRSSFIFYCIFPNHIQH 598
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 26.2 bits (55), Expect = 1.8
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -2
Query: 225 SHLLVASS*SAEMTELYSFR--SDLPESLASTDIVEKCRNYNRAGLLKSSIS 76
S LL+A + + ++TE+ +F S++ + A D + +NY A L+ SSIS
Sbjct: 1167 SALLIAYAKTNQLTEMETFLIGSNVADVKAVGDECFESKNYEAAKLMYSSIS 1218
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 1.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 177 TIQSFPLTTMMQPKDASNFNPNRMVR 254
T++ PL+ M + KD+S F NR+++
Sbjct: 209 TVEPTPLSFMSEMKDSSQFYANRVMK 234
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 25.4 bits (53), Expect = 3.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 351 IFWCPVVHSL*EKLIVLDSALLSSSVTVFFMMYEPFGSD*SCSHL 217
IFW + +K I +D+ +L+ T +EP G+ HL
Sbjct: 324 IFWTEIYDQSEKKWIAVDAVVLNGVYTNDMTWFEPKGAYAESKHL 368
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 4.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 188 ISADYDDATKRCEQLQSEPNGSYIIKNTVT-ELLNNAESNTINFSYKLWTT 337
+ D DA K C + Q + ++K VT E L S+ IN K+ TT
Sbjct: 468 VEKDDRDAIKECVETQLNKQINLLVKKRVTEENLEQEISSIINDLPKISTT 518
>SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 24.6 bits (51), Expect = 5.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 316 EINCVRFGIVKQLRNCVLYDVRTIRFGLKLLASFGCIIV 200
++ + FG +QL C LYD+ +G ++ +FG +V
Sbjct: 114 KLTSMHFG--QQLNPC-LYDIEKFEYGHEIFCTFGVRLV 149
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 254 YIIKNTVTELLNNAESNT 307
YII TVTE ++N +S+T
Sbjct: 481 YIIPETVTEAISNYDSST 498
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 24.2 bits (50), Expect = 7.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 200 YDDATKRCEQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQS 361
Y++ RC+ + P T T+ +NN + N K +T G Q+++ S
Sbjct: 525 YENHKNRCDPINYVPMNDASHVMTCTKAMNNFKRNATFMRTKSYTFG-QSVLAS 577
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 23.8 bits (49), Expect = 9.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 224 EQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFXL 385
EQL++ N + K + LLN T NF KL + Q I + P+E L
Sbjct: 61 EQLETVQNENEENKTKLAALLNRFHEETDNFLSKL-SLCQQEIQDTFKPVEANL 113
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 23.8 bits (49), Expect = 9.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 298 FGIVKQLRNCVLYDVRTIRFGLKLLAS 218
FG + +C+LYD+RT+ +++ S
Sbjct: 643 FGTGEMYMDCLLYDLRTLYSEIEIRVS 669
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 23.8 bits (49), Expect = 9.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 171 NYTIQSFPLTTMMQPKDASNFNPNRMV 251
N ++FP T P ++NPN +V
Sbjct: 258 NVNCENFPTTVPNYPFQQPSYNPNALV 284
>SPBC651.07 |csa1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 268
Score = 23.8 bits (49), Expect = 9.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 227 QLQSEPNGSYIIKNTVTELLNNAESNTINFS 319
++ P+G +T+T+L + +E+N IN S
Sbjct: 155 EIAENPSGYASALHTLTQLDDGSETNAINVS 185
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 23.8 bits (49), Expect = 9.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 215 KRCEQLQSEPNGSYIIKNTVTELLNNAESNTINFSYKLWTTGHQNIVQS 361
K E+L + ++ N+V LN+ NF Y +W+ N QS
Sbjct: 803 KMNEELSTTDEAVKLLANSV---LNDVHPRVPNFRYFIWSVPMNNWFQS 848
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 162 PTENYTIQSFPLTTMMQPKDASNFNPNRMV 251
P+EN +QS T + +++S+F PN V
Sbjct: 365 PSENPQLQSGFTTPNLSRRNSSDFGPNSPV 394
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,546,407
Number of Sequences: 5004
Number of extensions: 28130
Number of successful extensions: 95
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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