Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C20
         (391 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0149 - 14452654-14452666,14452943-14454699,14454886-144549...    27   4.0  
05_06_0243 - 26639497-26641173                                         27   4.0  
09_04_0123 + 14843808-14843913,14845272-14845383,14846284-14846434     27   5.3  
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    27   7.0  
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894...    26   9.2  
01_02_0016 - 10199085-10199170,10200649-10201456                       26   9.2  

>07_03_0149 -
           14452654-14452666,14452943-14454699,14454886-14454990,
           14455808-14455978,14456309-14456641,14456900-14457492,
           14458864-14458906
          Length = 1004

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 185 VISADYDDATKRCEQLQSEPN 247
           V+ +D +D  +RCEQL SE N
Sbjct: 111 VLDSDDEDEAERCEQLASENN 131


>05_06_0243 - 26639497-26641173
          Length = 558

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 173 LYNSVISADYDDATKRCEQLQ 235
           L NSV  A Y+D  K C QLQ
Sbjct: 272 LRNSVAKASYEDVFKSCPQLQ 292


>09_04_0123 + 14843808-14843913,14845272-14845383,14846284-14846434
          Length = 122

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = +2

Query: 92  NNPARL*LR------HFSTMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGS 253
           N PARL L       H+   S +  + G S  KL+   ++   D  T    +  SEPN S
Sbjct: 40  NEPARLRLHKICSATHWKEPSYDFEEQGPSHLKLFTCKVTIHVDTFTTTIVECISEPNRS 99


>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
            21366685-21366813,21366999-21367103,21367196-21367387,
            21367486-21367639,21368148-21368209,21368291-21368437,
            21368517-21368564,21369091-21369228,21369305-21369451,
            21370579-21370665,21370754-21370861,21370941-21371041,
            21371870-21371996,21372820-21372936,21373029-21373106,
            21373240-21373284,21373637-21373756,21373838-21373964,
            21374033-21374253,21374347-21374529,21374772-21374924,
            21375051-21375146,21375226-21375331,21375410-21375492,
            21375576-21375728,21375819-21376058,21376367-21376414,
            21376782-21376928,21377007-21377115,21377200-21377345,
            21377715-21377809,21377944-21378049,21378177-21378368,
            21378456-21378686,21378772-21378866,21379426-21379529,
            21380040-21380284,21380300-21380347,21380376-21380480,
            21380630-21380767,21381458-21381649,21381738-21381914,
            21382001-21382129,21382203-21382316,21382407-21382746,
            21382836-21383064,21383155-21383455,21384311-21384358,
            21387963-21388355
          Length = 2493

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = +2

Query: 131  MSVEASDSGKSDRKLYNSVISADYDDATKRCEQL--QSEPNGSYIIKNTVTELLNNAESN 304
            + +   ++  S +++  S +    + AT+    L   S+  G Y++ N +   L    ++
Sbjct: 2338 LQLNKMNASASAQQMNQSQLDVQIETATELFRNLVMNSDTEGRYLLLNAIANQLRYPNNH 2397

Query: 305  TINFSY---KLWTTGHQNIVQ 358
            T  FS+    L++  +Q IVQ
Sbjct: 2398 THYFSFIILYLFSEANQEIVQ 2418


>02_05_0402 +
           28687597-28687671,28688123-28688235,28688927-28689432,
           28689544-28689717,28689953-28690082,28692241-28692772,
           28693578-28693823,28694648-28695061
          Length = 729

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +2

Query: 119 HFSTMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSE 241
           HFS   + ASD   +++K  ++  + DY++  K+  +L+ +
Sbjct: 106 HFSEPKIHASDVADAEQKDTSNQQTWDYNELVKKYYELEEQ 146


>01_02_0016 - 10199085-10199170,10200649-10201456
          Length = 297

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/47 (25%), Positives = 27/47 (57%)
 Frame = +2

Query: 116 RHFSTMSVEASDSGKSDRKLYNSVISADYDDATKRCEQLQSEPNGSY 256
           +  S +SVE SD G +D +  +  +  + ++  +  ++++S+ NG Y
Sbjct: 49  KRMSRLSVEGSDGGDADDE-DDGYLRGEEEEEEEDGDEVRSDVNGEY 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,342,869
Number of Sequences: 37544
Number of extensions: 160942
Number of successful extensions: 377
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)