Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C20
         (391 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    30   0.67 
Z67884-2|CAA91808.1|  429|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical...    27   3.6  

>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 29.9 bits (64), Expect = 0.67
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 179 NSVIS-ADYDDATKRCEQLQSEPNGSYIIKNTVTELLNNA 295
           N+VI   DY+ A KR +QL  + NG  ++ + + E  NN+
Sbjct: 607 NTVIKLGDYEMARKRYDQLVKDCNGKCVLVDYLPEFYNNS 646


>Z67884-2|CAA91808.1|  429|Caenorhabditis elegans Hypothetical
           protein T14G8.4 protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 363 QL*TIFWCPVVHSL*EKLIVLDSALLSSSVTVFFMMYEPFGSD*SCSHLLVASS 202
           QL  + WCP +      ++ L++AL  S  TVF   Y  +  D +  +L VAS+
Sbjct: 237 QLNIVMWCPFIVGT---VVNLNAALRQSLYTVFVENYLDYEEDQTAHNLNVAST 287


>Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical
           protein F26A3.6 protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 192 EMTELYSFRSDLPESLASTDIVEKCRNYNRAGLLKSS 82
           ++T + ++  D+P+ L   +  +KCRN N+   L +S
Sbjct: 334 DLTRIENWEEDIPKDLPGYEDAKKCRNDNQRSCLITS 370


>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
           protein Y75B8A.26 protein.
          Length = 1144

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = -1

Query: 325 FVREINCVRFGIVKQLRN-CVLYDVRTIRFG----LKLLASFGCIIVVSGND*IV*FSVG 161
           F  +IN +R   VK LRN C+L  +  +       L  + SF C ++ S ++  +  SV 
Sbjct: 137 FEDQINRLRAKEVKMLRNVCILSRIVDVANAASPFLVAIGSFTCYVLWSPDENGLTPSVA 196

Query: 160 FARITCFNR 134
           F  +T FN+
Sbjct: 197 FVALTIFNQ 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,575,187
Number of Sequences: 27780
Number of extensions: 159880
Number of successful extensions: 488
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)