Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C18
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060987-1|AAL28535.1|  221|Drosophila melanogaster GM14561p pro...   256   1e-68
AE014296-3105|AAF49190.2|  221|Drosophila melanogaster CG11577-P...   256   1e-68
AY094698-1|AAM11051.1|  189|Drosophila melanogaster GH10427p pro...    38   0.016
AE013599-997|AAF58856.1|  189|Drosophila melanogaster CG12918-PA...    38   0.016

>AY060987-1|AAL28535.1|  221|Drosophila melanogaster GM14561p
           protein.
          Length = 221

 Score =  256 bits (628), Expect = 1e-68
 Identities = 116/165 (70%), Positives = 136/165 (82%)
 Frame = +2

Query: 137 EEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYXKSELRL 316
           EE+ GV+YANRCE CKIL TEL+ RL ETGK H+VIEIGYS+DDV+PKK+T+Y +SELRL
Sbjct: 25  EEEQGVRYANRCEACKILATELEARLGETGKSHDVIEIGYSVDDVKPKKRTEYRRSELRL 84

Query: 317 IESLEGVCDXXLEYNIHKERSDSTRFAKGMSQTFKTLHGLVXKGVKVDLGIPLELWDKPS 496
           +ESLE VC+  LEYN+HKERSDSTRFAKGMSQTF+TLHGLV KGVKVDLGIP ELWDKP 
Sbjct: 85  LESLENVCERVLEYNLHKERSDSTRFAKGMSQTFQTLHGLVDKGVKVDLGIPYELWDKPP 144

Query: 497 AEITHMKTQCESLLQXNEIXVEXWYWNHQGKXXLKIYLCTKHALK 631
            E+T MKTQCE+LL+  E  +  WY+ HQ +  LK +LC  H LK
Sbjct: 145 VEVTQMKTQCENLLEEYEETISDWYFKHQDEKSLKKHLCEDHVLK 189


>AE014296-3105|AAF49190.2|  221|Drosophila melanogaster CG11577-PA
           protein.
          Length = 221

 Score =  256 bits (628), Expect = 1e-68
 Identities = 116/165 (70%), Positives = 136/165 (82%)
 Frame = +2

Query: 137 EEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYXKSELRL 316
           EE+ GV+YANRCE CKIL TEL+ RL ETGK H+VIEIGYS+DDV+PKK+T+Y +SELRL
Sbjct: 25  EEEQGVRYANRCEACKILATELEARLGETGKSHDVIEIGYSVDDVKPKKRTEYRRSELRL 84

Query: 317 IESLEGVCDXXLEYNIHKERSDSTRFAKGMSQTFKTLHGLVXKGVKVDLGIPLELWDKPS 496
           +ESLE VC+  LEYN+HKERSDSTRFAKGMSQTF+TLHGLV KGVKVDLGIP ELWDKP 
Sbjct: 85  LESLENVCERVLEYNLHKERSDSTRFAKGMSQTFQTLHGLVDKGVKVDLGIPYELWDKPP 144

Query: 497 AEITHMKTQCESLLQXNEIXVEXWYWNHQGKXXLKIYLCTKHALK 631
            E+T MKTQCE+LL+  E  +  WY+ HQ +  LK +LC  H LK
Sbjct: 145 VEVTQMKTQCENLLEEYEETISEWYFKHQDEKSLKKHLCEDHVLK 189


>AY094698-1|AAM11051.1|  189|Drosophila melanogaster GH10427p
           protein.
          Length = 189

 Score = 37.5 bits (83), Expect = 0.016
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +2

Query: 167 RCEVCKILXTELQNRLEETGKVHEVIEI-GYSLDDV--QPKKKTKYXKSELRLIESLEGV 337
           +C VCK + TEL+  + +    H++ ++ G+ LD       KK +  KSE+ L E +E +
Sbjct: 26  KCHVCKAVVTELEEAIAKEDP-HKMADVSGFRLDAQGNSISKKVRLVKSEMFLTELMEKI 84

Query: 338 CDXXLEY 358
           C+   +Y
Sbjct: 85  CEKMDDY 91


>AE013599-997|AAF58856.1|  189|Drosophila melanogaster CG12918-PA
           protein.
          Length = 189

 Score = 37.5 bits (83), Expect = 0.016
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +2

Query: 167 RCEVCKILXTELQNRLEETGKVHEVIEI-GYSLDDV--QPKKKTKYXKSELRLIESLEGV 337
           +C VCK + TEL+  + +    H++ ++ G+ LD       KK +  KSE+ L E +E +
Sbjct: 26  KCHVCKAVVTELEEAIAKEDP-HKMADVSGFRLDAQGNSISKKVRLVKSEMFLTELMEKI 84

Query: 338 CDXXLEY 358
           C+   +Y
Sbjct: 85  CEKMDDY 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,327,431
Number of Sequences: 53049
Number of extensions: 468410
Number of successful extensions: 942
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)