Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_C18
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical ... 101 3e-22
Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical pr... 36 0.019
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 1.6
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 2.9
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 29 2.9
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 29 2.9
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 29 2.9
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 29 2.9
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 2.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 2.9
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 3.8
Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical pr... 28 5.0
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 28 6.7
U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical p... 28 6.7
AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 27 8.8
AC006632-4|AAK85475.1| 374|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 101 bits (243), Expect = 3e-22
Identities = 46/107 (42%), Positives = 68/107 (63%)
Frame = +2
Query: 329 EGVCDXXLEYNIHKERSDSTRFAKGMSQTFKTLHGLVXKGVKVDLGIPLELWDKPSAEIT 508
E +C+ E+ IHKE++ RF++ S+T +TL + KGVKV+LG+P E+WD+PSAEI
Sbjct: 75 ENICNGFNEFKIHKEKTGLERFSRAQSKTIETLKQMREKGVKVELGMPFEMWDQPSAEIF 134
Query: 509 HMKTQCESLLQXNEIXVEXWYWNHQGKXXLKIYLCTKHALKGVDDSC 649
++ CESLL+ E +E W+ N L LC ++ALK + SC
Sbjct: 135 ALRQGCESLLEDYEDLIEEWFINKASLEDLFKQLCARNALKNQETSC 181
>AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 101 bits (243), Expect = 3e-22
Identities = 46/107 (42%), Positives = 68/107 (63%)
Frame = +2
Query: 329 EGVCDXXLEYNIHKERSDSTRFAKGMSQTFKTLHGLVXKGVKVDLGIPLELWDKPSAEIT 508
E +C+ E+ IHKE++ RF++ S+T +TL + KGVKV+LG+P E+WD+PSAEI
Sbjct: 75 ENICNGFNEFKIHKEKTGLERFSRAQSKTIETLKQMREKGVKVELGMPFEMWDQPSAEIF 134
Query: 509 HMKTQCESLLQXNEIXVEXWYWNHQGKXXLKIYLCTKHALKGVDDSC 649
++ CESLL+ E +E W+ N L LC ++ALK + SC
Sbjct: 135 ALRQGCESLLEDYEDLIEEWFINKASLEDLFKQLCARNALKNQETSC 181
>Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical
protein F09E8.2b protein.
Length = 310
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 134 SEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPKKKT--KYXKSE 307
S+++V +K +C C L + L++T + H ++ D ++K KY SE
Sbjct: 16 SQKEVTIKN-EKCRTCNFLVSTFDEGLKKTARHH------FAGGDTAWEEKNLGKYKTSE 68
Query: 308 LRLIESLEGVC 340
RLIE LEGVC
Sbjct: 69 TRLIEVLEGVC 79
>Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical
protein F09E8.2a protein.
Length = 356
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 134 SEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPKKKT--KYXKSE 307
S+++V +K +C C L + L++T + H ++ D ++K KY SE
Sbjct: 16 SQKEVTIKN-EKCRTCNFLVSTFDEGLKKTARHH------FAGGDTAWEEKNLGKYKTSE 68
Query: 308 LRLIESLEGVC 340
RLIE LEGVC
Sbjct: 69 TRLIEVLEGVC 79
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 116 DDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPK--KKT 289
D N +K+ EDV KY N+ + + + N+L+ T V ++ ++ S D + P+ K
Sbjct: 4093 DGNAVKNVEDVVSKYQNQPQPLDVAKDD-ANKLKAT--VEQLTKLAESSDKIDPQVAKDI 4149
Query: 290 KYXKSELR-LIESLE 331
K K++ + L+++LE
Sbjct: 4150 KDSKTKAKELLQALE 4164
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 137 EEDVGVKYANRCEVCKILXTELQNRLEETGKVH--EVIEIGYSLDDVQPKKKT-KYXKSE 307
+ED K + E K+ TEL+ + ++T + H V ++ S D + +KT K KSE
Sbjct: 289 QEDETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSE 348
Query: 308 L 310
L
Sbjct: 349 L 349
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 137 EEDVGVKYANRCEVCKILXTELQNRLEETGKVH--EVIEIGYSLDDVQPKKKT-KYXKSE 307
+ED K + E K+ TEL+ + ++T + H V ++ S D + +KT K KSE
Sbjct: 291 QEDETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSE 350
Query: 308 L 310
L
Sbjct: 351 L 351
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 98 RNVICRDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQP 277
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 272 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 330
Query: 278 KKKTKYXK 301
K K K K
Sbjct: 331 KLKEKVEK 338
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 98 RNVICRDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQP 277
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 306 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 364
Query: 278 KKKTKYXK 301
K K K K
Sbjct: 365 KLKEKVEK 372
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 98 RNVICRDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQP 277
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 403 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 461
Query: 278 KKKTKYXK 301
K K K K
Sbjct: 462 KLKEKVEK 469
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 98 RNVICRDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQP 277
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 466 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 524
Query: 278 KKKTKYXK 301
K K K K
Sbjct: 525 KLKEKVEK 532
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 137 EEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKYXKSEL 310
E+D +++ N+ + + TE Q E K E++EI D++Q + + +Y E
Sbjct: 835 EQDAYLQHQNKLDDGILKETEAQTTAENPEKSMEMVEIECQTDEIQEELAEDEEYWDEEY 894
Query: 311 RLIESLEG 334
E LEG
Sbjct: 895 WDEEELEG 902
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 137 EEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKYXKSEL 310
E+D +++ N+ + + TE Q E K E++EI D++Q + + +Y E
Sbjct: 835 EQDAYLQHQNKLDDGILKETEAQTTAENPEKSMEMVEIECQTDEIQEELAEDEEYWDEEY 894
Query: 311 RLIESLEG 334
E LEG
Sbjct: 895 WDEEELEG 902
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 113 RDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 289
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 290 K 292
+
Sbjct: 593 R 593
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 113 RDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 289
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 290 K 292
+
Sbjct: 593 R 593
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 113 RDDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 289
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 290 K 292
+
Sbjct: 593 R 593
>Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical
protein D2045.9 protein.
Length = 534
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 203 QNRLEETGKVHEVIEIGYSLDDVQPKKKTKYXKSELRLIESLEGVCD 343
Q RL K+ +++ I YSL + +K EL+ + LEG D
Sbjct: 301 QERLNRMQKIFDILGIEYSLLEATDGQKLDELPEELKNYQILEGYLD 347
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 27.9 bits (59), Expect = 6.7
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +2
Query: 200 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYXKSELRLIES-LEGVCDXXLEYNIH--- 367
L+NR + GK++EV++I D KT +S+ +I S +EG+ NI
Sbjct: 78 LKNRSFKLGKINEVLKILLDFDSF----KTPETESQSNMIGSYMEGLSKILKRLNIARDD 133
Query: 368 --KERSDSTRFAKGMSQT 415
K SD TR+ +Q+
Sbjct: 134 SLKSLSDETRYLNRFNQS 151
>U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical
protein B0361.2a protein.
Length = 460
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 182 KILXTELQNRLEETGKVHEVIEIGYSLDDVQPKKKTK 292
KIL E++ + K+ +E G S DD PK K+K
Sbjct: 84 KILKAEMKGDTDLVKKLKRKLESGISGDDEPPKSKSK 120
>AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical
protein Y106G6D.1 protein.
Length = 287
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 116 DDNDIKSEEDVGVKYANRCEVCKILXTELQNRLEETGKVHEVIEIGYSLDD 268
++N +S + + K N E CK+L L + G +H + + + DD
Sbjct: 178 ENNFYESRKSINTKLINYMEECKLLQELKDEMLTQKGFLHSIAKKKQTEDD 228
>AC006632-4|AAK85475.1| 374|Caenorhabditis elegans Hypothetical
protein F28A10.9 protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 126 ILNQRKMSVSNTPIDVKFAKFXQRN-CRTDSKRPAK 230
ILNQ K+ + ID+ F K + N CR SK K
Sbjct: 62 ILNQIKLPATFLIIDIDFLKLLENNDCRWSSKNKIK 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,609,984
Number of Sequences: 27780
Number of extensions: 262295
Number of successful extensions: 632
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -