Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C16
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...   263   4e-70
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...   263   4e-70
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...   263   4e-70
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...   263   4e-70
U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...   258   8e-69
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    92   1e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr...    34   0.31 
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai...    31   2.9  
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai...    31   2.9  
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.                31   2.9  
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.               31   3.8  
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592...    31   3.8  
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592...    31   3.8  
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592...    31   3.8  
AK126695-1|BAC86646.1|  398|Homo sapiens protein ( Homo sapiens ...    30   6.7  
AK023048-1|BAB14374.1|  171|Homo sapiens protein ( Homo sapiens ...    30   6.7  

>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  263 bits (644), Expect = 4e-70
 Identities = 124/141 (87%), Positives = 132/141 (93%)
 Frame = +3

Query: 141 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 320
           P  A+ P+IKLFG+WS  DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREXSTRI 500
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE STRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 501 GRAGTVRRQAVDVSPLRRVNQ 563
           GRAGTVRRQAVDVSPLRRVNQ
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQ 149


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  263 bits (644), Expect = 4e-70
 Identities = 124/141 (87%), Positives = 132/141 (93%)
 Frame = +3

Query: 141 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 320
           P  A+ P+IKLFG+WS  DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREXSTRI 500
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE STRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 501 GRAGTVRRQAVDVSPLRRVNQ 563
           GRAGTVRRQAVDVSPLRRVNQ
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQ 149


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score =  263 bits (644), Expect = 4e-70
 Identities = 124/141 (87%), Positives = 132/141 (93%)
 Frame = +3

Query: 141 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 320
           P  A+ P+IKLFG+WS  DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREXSTRI 500
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE STRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 501 GRAGTVRRQAVDVSPLRRVNQ 563
           GRAGTVRRQAVDVSPLRRVNQ
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQ 149


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  263 bits (644), Expect = 4e-70
 Identities = 124/141 (87%), Positives = 132/141 (93%)
 Frame = +3

Query: 141 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 320
           P  A+ P+IKLFG+WS  DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68

Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREXSTRI 500
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE STRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 501 GRAGTVRRQAVDVSPLRRVNQ 563
           GRAGTVRRQAVDVSPLRRVNQ
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQ 149


>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  258 bits (633), Expect = 8e-69
 Identities = 122/141 (86%), Positives = 130/141 (92%)
 Frame = +3

Query: 141 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 320
           P  A+ P+IKLFG+WS  DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA   FRKAQCPI
Sbjct: 9   PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68

Query: 321 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREXSTRI 500
           VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE STRI
Sbjct: 69  VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128

Query: 501 GRAGTVRRQAVDVSPLRRVNQ 563
           GRAGTVRRQAVDVSPLRRVNQ
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQ 149


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 107

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 45/52 (86%), Positives = 46/52 (88%)
 Frame = +3

Query: 306 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 461
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE  L  LV A
Sbjct: 1   AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52


>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
            protein.
          Length = 1640

 Score = 34.3 bits (75), Expect = 0.31
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 369  CHCSDRASLESL*GAPRLGTGLYGNACVHTC 277
            C C + ++ E   G  R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453



 Score = 29.5 bits (63), Expect = 8.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 369 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 277
           C+C++R     L GA     GLYG  C  TC
Sbjct: 686 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 716


>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
            protein.
          Length = 1229

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 369  CHCSDRASLESL*GAPRLGTGLYGNACVH 283
            C C + ++ E   G  R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141



 Score = 29.5 bits (63), Expect = 8.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 369 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 277
           C+C++R     L GA     GLYG  C  TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536


>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
            protein.
          Length = 1229

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 369  CHCSDRASLESL*GAPRLGTGLYGNACVH 283
            C C + ++ E   G  R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141



 Score = 29.5 bits (63), Expect = 8.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 369 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 277
           C+C++R     L GA     GLYG  C  TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536


>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
          Length = 1246

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 369  CHCSDRASLESL*GAPRLGTGLYGNACVH 283
            C C + ++ E   G  R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158



 Score = 29.5 bits (63), Expect = 8.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 369 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 277
           C+C++R     L GA     GLYG  C  TC
Sbjct: 523 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 553


>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
          Length = 1317

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 222  QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 365
            Q+++  +E Y  ++  S GR   KR+   QC       NSL  H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085


>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
            protein.
          Length = 1267

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 222  QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 365
            Q+++  +E Y  ++  S GR   KR+   QC       NSL  H RNN
Sbjct: 989  QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035


>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
            protein.
          Length = 1267

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 222  QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 365
            Q+++  +E Y  ++  S GR   KR+   QC       NSL  H RNN
Sbjct: 989  QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035


>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
            protein.
          Length = 1267

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 222  QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 365
            Q+++  +E Y  ++  S GR   KR+   QC       NSL  H RNN
Sbjct: 989  QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035


>AK126695-1|BAC86646.1|  398|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44741 fis, clone BRACE3027931. ).
          Length = 398

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 196 MCKSLICLCRTTFPLKRSTQNIYLIQLA 279
           +CKS  C+C +T  +  ST+  Y  QLA
Sbjct: 259 VCKSTYCICNSTHCVCNSTRTAYATQLA 286


>AK023048-1|BAB14374.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12986 fis, clone NT2RP3000055. ).
          Length = 171

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 196 MCKSLICLCRTTFPLKRSTQNIYLIQLA 279
           +CKS  C+C +T  +  ST+  Y  QLA
Sbjct: 32  VCKSTYCICNSTHCVCNSTRTAYATQLA 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,394,639
Number of Sequences: 237096
Number of extensions: 1685804
Number of successful extensions: 2966
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2966
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)