Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_C13
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   349   1e-96
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   349   2e-96
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   348   3e-96
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   348   3e-96
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   241   4e-64
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    31   1.3  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    31   1.3  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    31   1.3  
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro...    28   7.2  
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P...    28   7.2  
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P...    28   7.2  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  349 bits (858), Expect = 1e-96
 Identities = 161/177 (90%), Positives = 167/177 (94%), Gaps = 1/177 (0%)
 Frame = +3

Query: 15  WCHFVK-ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGXXRATVDDFPLCVH 191
           W   V  + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG  +ATV+DFPLCVH
Sbjct: 11  WKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVH 70

Query: 192 LVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 371
           LVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL
Sbjct: 71  LVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 130

Query: 372 XTGMRGAFGKPQGTVARVRIGQPIMSVRSTDRWKAQVIEALRRAKFKFPGRQKIYLS 542
            TGMRGAFGKPQGTVARVRIGQPIMSVRS+DR+KAQVIEALRRAKFKFPGRQKIY+S
Sbjct: 131 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVS 187


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  349 bits (857), Expect = 2e-96
 Identities = 159/170 (93%), Positives = 165/170 (97%)
 Frame = +3

Query: 33  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGXXRATVDDFPLCVHLVSDEYE 212
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG  +ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 213 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGA 392
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 393 FGKPQGTVARVRIGQPIMSVRSTDRWKAQVIEALRRAKFKFPGRQKIYLS 542
           FGKPQGTVARVRIGQPIMSVRS+DR+KAQVIEALRRAKFKFPGRQKIY+S
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVS 181


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  348 bits (855), Expect = 3e-96
 Identities = 159/168 (94%), Positives = 164/168 (97%)
 Frame = +3

Query: 39  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGXXRATVDDFPLCVHLVSDEYEQL 218
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG  +ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 219 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGAFG 398
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 399 KPQGTVARVRIGQPIMSVRSTDRWKAQVIEALRRAKFKFPGRQKIYLS 542
           KPQGTVARVRIGQPIMSVRS+DR+KAQVIEALRRAKFKFPGRQKIY+S
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVS 168


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  348 bits (855), Expect = 3e-96
 Identities = 159/168 (94%), Positives = 164/168 (97%)
 Frame = +3

Query: 39  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGXXRATVDDFPLCVHLVSDEYEQL 218
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG  +ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 219 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGAFG 398
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL TGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 399 KPQGTVARVRIGQPIMSVRSTDRWKAQVIEALRRAKFKFPGRQKIYLS 542
           KPQGTVARVRIGQPIMSVRS+DR+KAQVIEALRRAKFKFPGRQKIY+S
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVS 168


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  241 bits (590), Expect = 4e-64
 Identities = 123/170 (72%), Positives = 132/170 (77%)
 Frame = +3

Query: 33  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGXXRATVDDFPLCVHLVSDEYE 212
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG  +ATV+DFPLCVHLVSDEYE
Sbjct: 5   VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64

Query: 213 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLXTGMRGA 392
           QLSSEALEAGRICCNK ++   G D+    MR                          GA
Sbjct: 65  QLSSEALEAGRICCNK-MLSCAGADRLQTGMR--------------------------GA 97

Query: 393 FGKPQGTVARVRIGQPIMSVRSTDRWKAQVIEALRRAKFKFPGRQKIYLS 542
           FGKPQGTVARVRIGQPIMSVRS+DR+KAQVIEALRRAKFKFPGRQKIY+S
Sbjct: 98  FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVS 147


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 3    LSRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 116
            +S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1106 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 3   LSRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 116
           +S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 513 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 3    LSRLWCHFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 116
            +S L  H++ I  G R A CY   + + +P SR  R V
Sbjct: 1106 ISYLTAHYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p
           protein.
          Length = 1240

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +1

Query: 424 FALDSPSCPC----ALLTGGRHRSSRLCAVPSSSS 516
           FA D P CPC    A+L  GR R  R C   S+ S
Sbjct: 677 FAADLPLCPCTLDQAVLDKGRFRPDRECDKDSNPS 711


>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
           isoform B protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +1

Query: 424 FALDSPSCPC----ALLTGGRHRSSRLCAVPSSSS 516
           FA D P CPC    A+L  GR R  R C   S+ S
Sbjct: 677 FAADLPLCPCTLDQAVLDKGRFRPDRECDKDSNPS 711


>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
           isoform A protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +1

Query: 424 FALDSPSCPC----ALLTGGRHRSSRLCAVPSSSS 516
           FA D P CPC    A+L  GR R  R C   S+ S
Sbjct: 677 FAADLPLCPCTLDQAVLDKGRFRPDRECDKDSNPS 711


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,859,876
Number of Sequences: 53049
Number of extensions: 623116
Number of successful extensions: 1884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)