Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_C07
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 296 4e-80
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 289 3e-78
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 278 9e-75
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 193 3e-49
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 111 2e-24
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 58 2e-08
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 58 2e-08
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 58 2e-08
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 58 2e-08
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 58 2e-08
BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 6.5
AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 6.5
AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 6.5
D38024-1|BAA07227.1| 853|Homo sapiens facioscapulohumeral muscu... 29 8.6
BC024154-1|AAH24154.1| 934|Homo sapiens ATP11A protein protein. 29 8.6
AL356752-2|CAI16579.1| 934|Homo sapiens ATPase, Class VI, type ... 29 8.6
AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type ... 29 8.6
AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type ... 29 8.6
AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type ... 29 8.6
AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein. 29 8.6
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 296 bits (726), Expect = 4e-80
Identities = 141/157 (89%), Positives = 152/157 (96%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVK 174
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 289 bits (710), Expect = 3e-78
Identities = 139/157 (88%), Positives = 150/157 (95%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
LRRLVR+GVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL+SP G GRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVK 174
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 278 bits (682), Expect = 9e-75
Identities = 135/157 (85%), Positives = 146/157 (92%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 276
R FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KDP+RLFEGNAL
Sbjct: 18 RSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNAL 77
Query: 277 LRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 456
L RLV IGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RV
Sbjct: 78 LWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRV 137
Query: 457 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVK 567
RKQVVNIPSFIVRLDS KHIDFSL SP+GGGRP RVK
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVK 174
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 193 bits (471), Expect = 3e-49
Identities = 92/103 (89%), Positives = 99/103 (96%)
Frame = +1
Query: 241 KDPKRLFEGNALLRRLVRIGVLDEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 420
+DP+RLFEGNALLRRLVRIGVLDE +MKL Y+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 421 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 549
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 111 bits (266), Expect = 2e-24
Identities = 50/56 (89%), Positives = 56/56 (100%)
Frame = +1
Query: 97 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFE 264
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFE
Sbjct: 9 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = +1
Query: 127 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 306
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 307 DEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 486
+ L + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 487 IV 492
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = +1
Query: 127 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 306
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 307 DEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 486
+ L + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 487 IV 492
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = +1
Query: 127 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 306
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 307 DEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 486
+ L + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 487 IV 492
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = +1
Query: 127 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 306
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 307 DEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 486
+ L + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 487 IV 492
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 58.4 bits (135), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (49%)
Frame = +1
Query: 127 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 306
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 307 DEKQMKLXYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 486
+ L + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 487 IV 492
+V
Sbjct: 149 LV 150
>BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43
protein.
Length = 783
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 363 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 503
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens
cDNA FLJ20315 fis, clone HEP07873. ).
Length = 783
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 363 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 503
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein.
Length = 783
Score = 29.9 bits (64), Expect = 6.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 363 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 503
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>D38024-1|BAA07227.1| 853|Homo sapiens facioscapulohumeral muscular
dystrophy protein.
Length = 853
Score = 29.5 bits (63), Expect = 8.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 102 RTSEVSRTSLKIPTVLCCSPSWRARTHCS 16
R S R L P C SWRAR+ CS
Sbjct: 820 RRSRSRRPGLHSPAACCWMSSWRARSFCS 848
>BC024154-1|AAH24154.1| 934|Homo sapiens ATP11A protein protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 438 PDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIXEFHLFFI 307
PD+ + +++G+++ F +LRL+ E+LN + HI F L I
Sbjct: 483 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEI 524
>AL356752-2|CAI16579.1| 934|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 934
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 438 PDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIXEFHLFFI 307
PD+ + +++G+++ F +LRL+ E+LN + HI F L I
Sbjct: 483 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEI 524
>AL356752-1|CAI16578.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 438 PDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIXEFHLFFI 307
PD+ + +++G+++ F +LRL+ E+LN + HI F L I
Sbjct: 509 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEI 550
>AL356740-1|CAH70242.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 438 PDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIXEFHLFFI 307
PD+ + +++G+++ F +LRL+ E+LN + HI F L I
Sbjct: 509 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEI 550
>AL139384-1|CAI16947.1| 1134|Homo sapiens ATPase, Class VI, type 11A
protein.
Length = 1134
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 438 PDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIXEFHLFFI 307
PD+ + +++G+++ F +LRL+ E+LN + HI F L I
Sbjct: 509 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEI 550
>AB028944-1|BAA82973.2| 1102|Homo sapiens KIAA1021 protein protein.
Length = 1102
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 438 PDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIXEFHLFFI 307
PD+ + +++G+++ F +LRL+ E+LN + HI F L I
Sbjct: 477 PDEVA-LVEGVQRLGFTYLRLKDNYMEILN-RENHIERFELLEI 518
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,416,027
Number of Sequences: 237096
Number of extensions: 1818425
Number of successful extensions: 3863
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3858
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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